PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT28014
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB_related
Protein Properties Length: 357aa    MW: 39831.1 Da    PI: 8.6712
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT28014genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.1e-1478120145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      r+ WT  Ed +l+++++ +G++ W+ Iar +  gR+++ +k++w+
         EMT28014  78 RKIWTDAEDIKLIELHQTWGNR-WSVIARLLS-GRSDNGVKNHWN 120
                      567*******************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.15E-1456128IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-1572124IPR009057Homeodomain-like
PROSITE profilePS5129416.55873127IPR017930Myb domain
SMARTSM007171.4E-1277125IPR001005SANT/Myb domain
PfamPF002497.0E-1280120IPR001005SANT/Myb domain
CDDcd001671.86E-1081123No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MGVIPPHRLT RLSSSASSDP TCMPQLGRFG HPKIMMFSPR FETMKSWWKE VLNNWQPRKS  60
LHSCLLLVGW EISKERNRKI WTDAEDIKLI ELHQTWGNRW SVIARLLSGR SDNGVKNHWN  120
ATKRSLNAKR RLKKRNSKQP PPGQLSLLAE YIRSVEPHTG SPVETPMMSP QFYHDQEHCG  180
QMGMAGRDAA IVIAPTVQAH PTYPNPAMTG THYHPNPANM QYWAQDLNVI DGPNEGYPYY  240
IPPNVHLNNR LWYGLSPTHM VSEQDIQQAA NASMNMYAFT GQHSLPASNL KAVAGMHREC  300
SANNQLGNMG GGAGGWSYYY DIDAVGPSCP AGGSASVSDP DEIDVVQMAS RVFAAQD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169707.10.0transcription factor MYB108-like
TrEMBLM8C1A30.0M8C1A3_AEGTA; Transcription factor MYB98
STRINGEMT280140.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188233101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.13e-16myb domain protein 98