 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT27813 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
YABBY |
| Protein Properties |
Length: 206aa MW: 22606.5 Da PI: 9.3455 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT27813 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 230.5 | 4.3e-71 | 9 | 179 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasql.laaeshldeslkeelleelkveeenl..ksnv..ekeesastsvssekl 101
+eqvCyv+CnfCnt+lavsvP +s++++vtvrCGhCt+llsv+l+ +++ ++ +++es + +++ +++ +s + ++++s+s++ ++ ++
EMT27813 9 PAEQVCYVHCNFCNTVLAVSVPGNSMLNIVTVRCGHCTNLLSVSLRGQMHSpVPPAAQVQESSLSKPNGSNGFIRDHSvyNSLEfgSSSSSSSSKFRMPTM 109
689******************************************98775425666667777666633333333322200222200223333333444444 PP
YABBY 102 senedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
++++++ + + rPPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl
EMT27813 110 MFSSQNDLLQEQTlHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 179
4455555554444379****************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:0010158 | Biological Process | abaxial cell fate specification |
| GO:1902183 | Biological Process | regulation of shoot apical meristem development |
| GO:2000024 | Biological Process | regulation of leaf development |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MSSSGQIAPA EQVCYVHCNF CNTVLAVSVP GNSMLNIVTV RCGHCTNLLS VSLRGQMHSP 60
VPPAAQVQES SLSKPNGSNG FIRDHSVYNS LEFGSSSSSS SSKFRMPTMM FSSQNDLLQE 120
QTLHARPPEK RQRVPSAYNR FIKEEIRRIK ANNPDISHRE AFSTAAKNWA HYPNIHFGLT 180
PERDGGKRLA VDDAAPAAKK IQGFCS
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT009106 | 0.0 | BT009106.1 Triticum aestivum clone wkm2n.pk008.p10:fis, full insert mRNA sequence. |
