PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT27133
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 310aa    MW: 33589.7 Da    PI: 5.2232
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT27133genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.7e-11145192355
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               + h ++Er+RR+++ + f  L +++P +     kK +K++ L  +++Y+k+L+
  EMT27133 145 QEHVIAERKRREKLQQQFVSLATIVPGL-----KKTDKISLLGSTIDYVKQLE 192
               5799************************.....9*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.348142191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.9E-9145192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-14146206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-15146204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.53E-9147196No hitNo description
SMARTSM003539.3E-11148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MEQPNQWLTQ TEQEELAYMY QQEGDPVTVP GMEQQFAEPP LPGHQEQYYT TSPMATPSFH  60
PSRSSDLPSF GGSSSLPNLP FGSATVKNEL GQPSPPPPSS NFLSFGAGQA GTLTFSGGAW  120
QHDGGEGTMQ LPAPERRSRA PANAQEHVIA ERKRREKLQQ QFVSLATIVP GLKKTDKISL  180
LGSTIDYVKQ LEDKVRALEK QGSRRSSEST TVFESKCRIS AADNDAAGPS GSEDAAEDSS  240
PAVEAIIRGN TALLKICFKE RRGVLVMVLS ELENQGLSII NTNVVPFTDS CLNITITAKA  300
RPLSIAQMRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150155ERKRRE
2151156RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156973.10.0transcription factor bHLH19-like
TrEMBLM8BZA60.0M8BZA6_AEGTA; Transcription factor bHLH25
STRINGEMT271330.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64013149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-32bHLH family protein