 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT26835 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
C2H2 |
| Protein Properties |
Length: 506aa MW: 55267.1 Da PI: 5.7412 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT26835 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 20.5 | 1.3e-06 | 264 | 285 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23
C +Cgk F+r nL+ H+r H
EMT26835 264 FCVICGKGFKRDANLRMHMRGH 285
6*******************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010044 | Biological Process | response to aluminum ion |
| GO:0010447 | Biological Process | response to acidic pH |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003676 | Molecular Function | nucleic acid binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 506 aa
Download sequence Send
to blast |
MASDASGNTE PGQQGVRFSS MDQSCFARPG QSIPGYPPFF GPQSSNFYLP DDSVAKACDL 60
FEPNPPQNNP VADWDPQAML SNLTFLEQKI KQVKDIVQSM GNRGSQDAGG SCELAAKQQL 120
VTADLTSIII QLISTAGSML PSMKTPLLSS NPAVRQLNTP GSPMGFGSIV NQRPSTIREE 180
VVNDISKTSD YEELMNTLNT AHDEKDDLIK CPNPCVGEGP EPVPMEDHDV KESDDGGEAE 240
HLPPGSYVVL QLEKEEILAP HTHFCVICGK GFKRDANLRM HMRGHGDEYK TPAALAKPMR 300
DSGSDPTPVT RYSCPYVGCK RNKEHRKFQP LKTILCVKNH YKRSHCDKRY TCSRCNTKKF 360
SVIADLKTHE KHCGRDKWLC SCGTTFSRKD KLFGHVALFQ GHTPALPMDD IKASGALEQP 420
QGSEAMDDMV ASTGYNFPGS TSDGIPNLDM KVADDTRGYF SPLNFDPCFG ALDDFARPGF 480
DISENPFSFL PSGPGSCSFG QLSGDS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may be involved in aluminum tolerance. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF034806 | 0.0 | KF034806.1 Triticum aestivum isolate D cultivar Saloio STOP1 gene, complete cds. |
| GenBank | KF034807 | 0.0 | KF034807.1 Triticum aestivum isolate D cultivar Ruivo STOP1 gene, complete cds. |
