 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT26633 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
WRKY |
| Protein Properties |
Length: 194aa MW: 21457.9 Da PI: 6.5066 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT26633 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 54.4 | 2.5e-17 | 19 | 52 | 2 | 34 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T--- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpv 34
dD+++WrKYGqK++kgs++pr+YY+C+s C+v
EMT26633 19 DDQWAWRKYGQKPIKGSPYPRGYYKCSSMkACTV 52
8*************************99878987 PP
|
| 2 | WRKY | 84.4 | 1.1e-26 | 56 | 114 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
dD+++WrKYGqK++kgs++pr+YY+C+s C+++k vers p v+++tY +H h
EMT26633 56 DDQWAWRKYGQKPIKGSPYPRGYYKCSSMkACTARKLVERSPAKPGVLVVTYIADHCHA 114
8*************************99889*************************996 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MKKVVREVPV AEGGVNGPDD QWAWRKYGQK PIKGSPYPRG YYKCSSMKAC TVNGPDDQWA 60
WRKYGQKPIK GSPYPRGYYK CSSMKACTAR KLVERSPAKP GVLVVTYIAD HCHAVPTNIS 120
ALAGTTRHPP QSPASDDTAL NRGDDSADVS WSAAGADDES ELWSPVDMDD FFASFDDDFD 180
HFFEDDAIGR RVSL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK111416 | 3e-51 | AK111416.1 Oryza sativa Japonica Group cDNA clone:002-182-G03, full insert sequence. |
| GenBank | AY676924 | 3e-51 | AY676924.1 Oryza sativa (indica cultivar-group) transcription factor WRKY03 (WRKY03) mRNA, complete cds. |
| GenBank | AY870601 | 3e-51 | AY870601.1 Oryza sativa (japonica cultivar-group) WRKY12 mRNA, complete cds. |
