PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

ERF

Protein Properties

Length: 124aa MW: 13422.8 Da PI: 7.6067

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT26497	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	62.5	9.3e-20	12	63	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g+++AeIrd s + r++lg+f+taeeAa+a+++ + +++g EMT26497 12 TKYRGVRRRP-WGKFAAEIRDSSR---HgVRVWLGTFDTAEEAAAAYDRSAYSMRG 63 69******.******432...25***********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00018	9.31E-28	12	73	No hit	No description
Pfam	PF00847	8.6E-14	12	63	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	3.4E-31	13	73	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	3.01E-23	13	72	IPR016177	DNA-binding domain
SMART	SM00380	4.1E-32	13	77	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	23.644	13	71	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.4E-11	14	25	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.4E-11	37	53	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009789	Biological Process	positive regulation of abscisic acid-activated signaling pathway
GO:0010186	Biological Process	positive regulation of cellular defense response
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0090332	Biological Process	stomatal closure
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence Send to blast
MAEGGEGSGS QTKYRGVRRR PWGKFAAEIR DSSRHGVRVW LGTFDTAEEA AAAYDRSAYS 60 MRGRNAILNF PDQAHVYETN ASRDGGGAGP SASAARTKVI ELECLEDGVL QEMLDGHDKS 120 SKSK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5wx9_A	8e-34	1	124	1	129	Ethylene-responsive transcription factor ERF096
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00029	PBM	Transfer from AT5G43410	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020195201.1	2e-87	ethylene-responsive transcription factor ERF096-like
Swissprot	Q9LSX0	1e-33	ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBL	A0A453MWY5	5e-86	A0A453MWY5_AEGTS; Uncharacterized protein
TrEMBL	M8CH08	5e-86	M8CH08_AEGTA; Ethylene-responsive transcription factor ERF096
STRING	EMT26497	8e-87	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP103	37	465

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43410.1	2e-31	ERF family protein

Publications ? help Back to Top
Zander M,Thurow C,Gatz C TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression. Plant Physiol., 2014. 165(4): p. 1671-1683 [PMID:24989234]