PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26426
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family FAR1
Protein Properties Length: 650aa    MW: 74918.5 Da    PI: 6.8293
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26426genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.99e-15136224190
      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
               +fY++YA   GF v +++++k+  ++e  + + +C+k  k++++k     + er++    +t+C  + k++ +  ++w+vt+   eHnHel 
  EMT26426 136 EFYQRYAIFHGFAVNTEYHRKK--TNEYSRGEIRCYKARKNKKSKGVapVVPERKRGIIVKTECPVRCKLNTD-GARWVVTEYFDEHNHELI 224
               6*************99998887..7779*************99988788999****************99999.9***************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.9E-11136224IPR004330FAR1 DNA binding domain
PfamPF105516.7E-30349442IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 650 aa     Download sequence    Send to blast
MAKTYEFYGK AQDHHATRGN KRQPGPSTTI NSGAGTSTAG TSEHTEGAFH QQVNNTATNN  60
AESVSELAIV PAMMTSTPLH TSTSNTQADE TTADTEVNDE TDDEAQGDEE DGQSEIMIPQ  120
PPYVGQRFGS FEDAKEFYQR YAIFHGFAVN TEYHRKKTNE YSRGEIRCYK ARKNKKSKGV  180
APVVPERKRG IIVKTECPVR CKLNTDGARW VVTEYFDEHN HELIKKFDLV KFLSAHKGFS  240
PLEKKFVKLL HDCNVGPSRM VQILSLIHSG DGRLSSMPYI PADVTNLKAK YRRESRLADI  300
EDTIACFEEK AKTDTDFFYW IRLDDEDRVR NMYWVDGAAR RAYTHFRDCI SFDATYLTNM  360
YKMPRAPFIG INNHNQSLQF GCRLVRNEDT DGYTWLFKTL LECMGGLAPM NIITDQGFSM  420
RASIEEVFPL AAHRHCRWHI IKKAEETLGP FFADRPELHK AFELCVDHSL TVEEFERSWT  480
AMIETYQVQD NETLTSLWEK RMYWVPAYFV QCFFPFLQTT QRSEGFNAVL KRCHVKYYAV  540
ALWKQTTQEK CGKNKDFHAI IDFRYVCYVT TYLNIRFQEE IKRASMYTTY QVDGHTVKVC  600
SLLGMSNSEP EDPDKGRNYF VKASINEGEY YCQCCKFERD GIVCCHCWGT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164923.10.0protein FAR1-RELATED SEQUENCE 5-like
TrEMBLM8CRW20.0M8CRW2_AEGTA; Uncharacterized protein
STRINGEMT264260.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1832967
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-71FAR1-related sequence 5