 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT25510 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 314aa MW: 34371.9 Da PI: 9.4218 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT25510 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.4 | 5.2e-18 | 106 | 160 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
EMT25510 106 RKKLRLTKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTK 160
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 125.7 | 2.1e-40 | 106 | 195 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rl+keq++lLE+ F+e+++L+p++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL++e +eLr +l
EMT25510 106 RKKLRLTKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELR-TL 195
69*************************************************************************************9.54 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MSQEEVHDAG LALGLSLGGG GGGGGDGPSS AHRSSNSGRL TLWEAEPSLT LSMPDDTTMT 60
GTASGGVSSM SVGGAVKRER ADEADLGEMV SSTAVGAEED DDGSTRKKLR LTKEQSALLE 120
DRFKEHSTLN PKQKVALAKQ LNLRPRQVEV WFQNRRARTK LKQTEVDCEF LKRCCETLTE 180
ENRRLQRELQ ELRTLKVCRP PDHLPPRIPS FSSNPPLATR VSSSNSGLAV GLRLAATTYP 240
SRHFHRAIVI LSIPLNPSPF FSSVGGHPVS VFEPSCLHLA FPLRRHNQLH GLWLRLVLAE 300
PSQHVTTFSF RLGR
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 104 | 110 | TRKKLRL |
| 2 | 154 | 162 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FP097788 | 1e-135 | FP097788.1 Phyllostachys edulis cDNA clone: bphylf059k15, full insert sequence. |
