PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT24735 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | NAC | ||||||||
Protein Properties | Length: 352aa MW: 38846.8 Da PI: 6.2842 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 152.2 | 2.4e-47 | 4 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppG+rF+Ptd +l+ +yLk+k+ gkkl+ + ++e+diy++ PwdLp k ++ +++ +wyfF++ +ky+tg+r+nr+ ++g Wkatgkd++v++ ++++ EMT24735 4 LPPGYRFQPTDVQLILYYLKRKILGKKLRR-NPVTEIDIYQFAPWDLPgKsSMPTGDLQWYFFCTCGRKYPTGSRTNRSNQAGHWKATGKDRKVVC-NSRT 102 79*************************999.88***************5346667888**************************************.999* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+k+tLvf+ g+ +k ++tdWvmheyrl EMT24735 103 VGMKRTLVFHAGKGRKEKRTDWVMHEYRL 131 ***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.67E-56 | 3 | 154 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.599 | 4 | 154 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-25 | 5 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MAPLPPGYRF QPTDVQLILY YLKRKILGKK LRRNPVTEID IYQFAPWDLP GKSSMPTGDL 60 QWYFFCTCGR KYPTGSRTNR SNQAGHWKAT GKDRKVVCNS RTVGMKRTLV FHAGKGRKEK 120 RTDWVMHEYR LVESEVLNAR VTLHDFVLCK VYQKSGPGPK IGEQYGAPFE EEEEEEEMND 180 ANGDASCLSH SSAPGPSHGG VLNSVGESVS DGARVSLSLL SANNGKSSSS GVRPDMASHP 240 DVNWDRIHIQ QLADILGCLS TNPVGQDGPP SDSTAYHDTE ALFDDSEAIF DIMDQVVPSS 300 LVSLCKQCDS CGVRLVDPFL EPVAGELYLE LNDLRLCHAG HVPDGSSQRC MP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-45 | 4 | 160 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-45 | 4 | 160 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-45 | 4 | 160 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-45 | 4 | 160 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-45 | 4 | 160 | 20 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-45 | 4 | 160 | 20 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-45 | 4 | 160 | 20 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-45 | 4 | 160 | 20 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-45 | 4 | 160 | 20 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-45 | 4 | 160 | 20 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-45 | 4 | 160 | 20 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-45 | 4 | 160 | 20 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-45 | 4 | 160 | 17 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-45 | 4 | 160 | 17 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020154400.1 | 0.0 | NAC domain-containing protein 82-like | ||||
TrEMBL | A0A453MNZ9 | 0.0 | A0A453MNZ9_AEGTS; Uncharacterized protein | ||||
STRING | EMT24735 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14856 | 17 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10500.1 | 8e-54 | NAC domain containing protein 53 |