PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT23685
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 350aa    MW: 37926.5 Da    PI: 6.1822
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT23685genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.39.9e-17247294355
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               + hn  ErrRRdriN+++  L+el+P++      K +Ka++L +A+eY+ksLq
  EMT23685 247 QVHNLSERRRRDRINEKMRALQELVPHC-----NKTDKASMLDEAIEYLKSLQ 294
               56*************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.30E-18241297No hitNo description
Gene3DG3DSA:4.10.280.105.4E-20241297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-20242306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.463244293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-14247294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-17250299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MNQFVPADWS GNMGDALPAL SGEDDGLVEL LWCGGHVVMQ SRAPPRPAVR EQEAAPWFQY  60
TVVDEDDYSV ERDLFSEIFD GMPADGAGRP CKEEDKQRGA ADAVTALRSG VMPPPLLTGK  120
AGLHGDGPRV SLASEAGESS VVTIGSRRVG GGGNQAQTAH VSDAAGDDSV PLPLIRNRKE  180
ARDSRSYHSA SATLTSSSTW SRPSGTSKRK QSEGPSEVMQ DVESNSADVT CETAQKPTTA  240
KRRRAAQVHN LSERRRRDRI NEKMRALQEL VPHCNKTDKA SMLDEAIEYL KSLQLQLPLM  300
WAMGGRMTLA PAPVMFPAGA HQYMQRMAAI SSRMPPFTTC AYSSNDPELS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241256RRRAAQVHNLSERRRR
2252257ERRRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189473.10.0transcription factor PIF4-like
TrEMBLM8BFH40.0M8BFH4_AEGTA; Transcription factor PIF3
STRINGEMT236850.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31073677
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.23e-33phytochrome interacting factor 3