PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT23621
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 1124aa    MW: 122661 Da    PI: 6.4671
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT23621genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.47e-151712541499
               T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3  14 grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
               + +++pk++a+ h   ++es t+tl++  ++++W  ++   kk+ ++ lt+ W +Fv++n++ egD+++F   +  + f ++v+++rk
  EMT23621 171 SYVTIPKEYAAVHF--PPESATITLRSpGKNKKWHPRF--YKKGTMIKLTGSWLHFVRDNDVHEGDICIFVPAKGgKPFMFTVHLLRK 254
               4589******9998..45789******5566*******..9999***************************77655999999999987 PP
2B3536.1e-17311407399
               EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
               +++t+s+ ++++++ l+k++a+eh   +++++tl+++   g+ W++++ +  rk+++r +l +GW++F ++n L+ gD+++F+l+++ +e +  v+++rk
  EMT23621 311 SIMTKSNLGSRHMVELSKRYAAEHL--PHRNVTLMFQY-MGKIWNINMLFhdRKYPKRWYLIGGWSKFISDNSLRLGDICLFELKKDeKELTVIVHLLRK 407
               6899********************5..34677888776.9********9999******99999**********************998999999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.106.6E-18153254IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.9E-19155254IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.956158255IPR003340B3 DNA binding domain
SMARTSM010194.4E-9161255IPR003340B3 DNA binding domain
CDDcd100178.66E-17161253No hitNo description
PfamPF023626.1E-13171254IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.8E-19298407IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-20303412IPR015300DNA-binding pseudobarrel domain
CDDcd100175.32E-20307403No hitNo description
SMARTSM010193.0E-14309408IPR003340B3 DNA binding domain
PROSITE profilePS5086312.915309408IPR003340B3 DNA binding domain
PfamPF023626.5E-14310407IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1124 aa     Download sequence    Send to blast
MYQTPPYPGA AEGAVPSSLM DTPLTEERRA ARRVRRRVCS SGSPTSLNHG ESDDAQEMST  60
NSTEISSSDC YTQLSSESSD EGCENRSSGH RRKRRKTSVI SSASEQSGQD SPSACESLES  120
DDVQITPGKD YVLPQRCDLS DAEKNRVVAL IKEIKAKVTV FVAIMLRSYS SYVTIPKEYA  180
AVHFPPESAT ITLRSPGKNK KWHPRFYKKG TMIKLTGSWL HFVRDNDVHE GDICIFVPAK  240
GGKPFMFTVH LLRKETTDSQ TEVSHESSEC EDSHGQPPYI LPYGARLSPS QRSAVKKKVD  300
SIQSEVPIYV SIMTKSNLGS RHMVELSKRY AAEHLPHRNV TLMFQYMGKI WNINMLFHDR  360
KYPKRWYLIG GWSKFISDNS LRLGDICLFE LKKDEKELTV IVHLLRKESI DHPSGVSPVL  420
DSNYVRASTM IASTVHVGEE PDDEEETASS GREEQGFDDE PIEHNYSEGA SKAHMPTAPC  480
SESNASGISP SPEAREQAAG CSNKSFATEF PNKPSSTMEH NRIIHTDRAA ASEVIGLSDY  540
RIHNSCDSID SQGGESLAVQ QQSSPSPGIG NSVNPLTVCL SLRCFVEPCG VHFLSFCKYF  600
IFMLLYCILR TFQNNSLYDM YQDSSSGDHR SAERVEGESD VALQSLVRVT GQQVGDAEKE  660
VNASGGENSL ADLPHLEPQN VAAVPSQAAL PMPKEKTDTQ TNRSAQPDVA QAQPPQGEVE  720
QAGLSGVASP QPLQPAQLAQ REAEQDLSGV ASPSQPETRP SISGFVETRS NLVTQSVEQS  780
IAPVQFPQEQ AGLSGVASAQ PLVPEMQPST PLSNIPLERA HPNRGQSSRQ PEAAAGSAQP  840
AQLFPAPSMM FNHPPIGDEP LKNELHRLRL HIDSLDKIYE LKQSQLQTEC SQEIEKIKQK  900
YDLLLEEQDS VHLEQMKTLD GLLEKVVFHQ SLAADFRAKF ISPSAAQAKA YSRPIHQTPQ  960
ASQQAPMRPP GMTSTSPPAA WSSAGRPVVP GGAQPSQVDR PSTPASSQAP RPPLPSTPVV  1020
RLPINPGNLV RTTGAPMPRV PPRGSHGVPS APAPHLQCRL PPRAHSTAPA NQRQQQHATS  1080
VSPQSSHAVP PVSSSPLPPS SSQATHHGSS TRMDVDVVCL SDDE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151567.10.0uncharacterized protein LOC109736772
TrEMBLM8CJU10.0M8CJU1_AEGTA; B3 domain-containing protein
STRINGEMT236210.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58531172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.17e-10B3 family protein