PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT23614
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 599aa    MW: 66401.8 Da    PI: 6.9493
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT23614genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM182.11.4e-5661331128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
               lppGfrFhPtdeel+ +yLk k++g+++el e+i+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s ++++
  EMT23614   6 LPPGFRFHPTDEELIIYYLKSKINGRQIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QKRA 104
               79****************************.99**************95334455777**************************************.9999 PP

       NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
               vg+kktLv+y+grap+g++tdWvmheyrl
  EMT23614 105 VGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133
               ***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-634156IPR003441NAC domain
PROSITE profilePS5100561.2236156IPR003441NAC domain
PfamPF023652.8E-297133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QKRAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEQPQWT  180
PSSVERSPTP CDGRGGGDDF ESSSFSFPTE APMTSGSMHG GGFGMQMMGG MPQEDGRWMQ  240
FLSEDAFNAT NPYFMNPAAA SNFSCLPSKA KEEVDNFYHM CGIGASMMRR DDEPGRLVEI  300
SDMQEFKEEK KRPVENLRGV KLVNNDLGEI VVEGDESNPA EGITHYPIQD TSENSGEAGH  360
HMTDHTTDEG GIDTAPIFSQ SQPDDFALAI GFDNDGDDNT DPNASFDLYG KVDVQRGLFV  420
SRVGAAKTFF HRVEPPNKVS FHLNPAASEV SKAIVEKFHY YLPVTSKVSG SGSSSSRVSV  480
FGKVKALIRG KFPTMRRPPS PLQHQRSETT VSELLQIVSL LLAPKEAVAE REEMVSRKKA  540
KKVKPGRWGC DGGCSSSGQL GLPGKGSNKG ISSMFLSGKW AFLTSALAAV RAPGPCNHL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-54116212171NO APICAL MERISTEM PROTEIN
1ut4_B1e-54116212171NO APICAL MERISTEM PROTEIN
1ut7_A1e-54116212171NO APICAL MERISTEM PROTEIN
1ut7_B1e-54116212171NO APICAL MERISTEM PROTEIN
4dul_A1e-54116212171NAC domain-containing protein 19
4dul_B1e-54116212171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00212DAPTransfer from AT1G65910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190976.10.0uncharacterized protein LOC109776722
TrEMBLM8BNT40.0M8BNT4_AEGTA; NAC domain-containing protein 78
STRINGEMT236140.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP66243651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-100NAC domain containing protein 28