PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT23464
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HB-other
Protein Properties Length: 228aa    MW: 26648 Da    PI: 7.3069
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT23464genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox41.71.9e-131031381853
               HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
  Homeobox  18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
               +F+ ++yp+++ r++L+++lg++ +qVk+WFqN+R+
  EMT23464 103 VFRDCPYPNEKLRKDLSERLGMSAQQVKFWFQNKRT 138
               699********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.5E-1555138IPR009057Homeodomain-like
SuperFamilySSF466896.42E-1158138IPR009057Homeodomain-like
SMARTSM003896.3E-770147IPR001356Homeobox domain
CDDcd000862.06E-1072137No hitNo description
PfamPF000466.2E-11103138IPR001356Homeobox domain
PROSITE profilePS5007112.6104143IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MDGDNSGVHN EFDLFMTSTH NHLLQHNHSD EMDDLLGAST IVGNTDDANV VVADHDNNDG  60
ETHSEQRMAT RRAKYHRLRS EQIQQLEAYN TYSINVSYLA KIVFRDCPYP NEKLRKDLSE  120
RLGMSAQQVK FWFQNKRTFN KGKMQRWETQ NCWVENEKLK TERQAIMLAM QNKTCLKCRG  180
VMVQTQHTLE FQCLYTENMR LKEELLHATA YLKEGLRRNG MSLPSARD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703067e-99HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020153975.11e-138homeobox-leucine zipper protein MERISTEM L1-like
TrEMBLM8BND51e-172M8BND5_AEGTA; Homeobox-leucine zipper protein ROC4
STRINGEMT234641e-173(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16772512
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.25e-26HD-ZIP family protein