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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT22079 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
MYB_related |
Protein Properties |
Length: 219aa MW: 24320.9 Da PI: 10.3086 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT22079 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 25.9 | 2.3e-08 | 5 | 34 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30
+++WT+eE+ l+ ++ ++G g W+tI +
EMT22079 5 KQKWTAEEEAALKAGIGKHGAGKWRTILKD 34
79*************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006334 | Biological Process | nucleosome assembly |
GO:0006357 | Biological Process | regulation of transcription from RNA polymerase II promoter |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009733 | Biological Process | response to auxin |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009739 | Biological Process | response to gibberellin |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0000786 | Cellular Component | nucleosome |
GO:0005730 | Cellular Component | nucleolus |
GO:0003691 | Molecular Function | double-stranded telomeric DNA binding |
GO:0033613 | Molecular Function | activating transcription factor binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0070491 | Molecular Function | repressing transcription factor binding |
GO:1990841 | Molecular Function | promoter-specific chromatin binding |
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MGAPKQKWTA EEEAALKAGI GKHGAGKWRT ILKDPEFSNI LRCRSNVDLK VRSCVRFLGC 60 QTMRASTRLE TLMTVERLQD KWRNMNVTVN ASGTRDKVRT TTTTTPTAKK PRSAPKQESH 120 STAITTITSD GDDDVIDVKP IIKPIVTFTT GSGNKSLSRL ENIILEAVKT LNEPTGSYKT 180 AVANYIEEQY WPPADFDHVL SAKLNELTSS GKLMKIIKR
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Functional Description ? help
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Source |
Description |
UniProt | Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK249564 | 1e-166 | AK249564.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf43k23, mRNA sequence. |
GenBank | AK376302 | 1e-166 | AK376302.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3120E05. |