 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT22068 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
YABBY |
| Protein Properties |
Length: 210aa MW: 21923.7 Da PI: 8.7095 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT22068 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 47.2 | 8.9e-15 | 40 | 72 | 4 | 36 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvt 36
seq+Cyv+C fC+t+l+vsvPs+slfk+vt
EMT22068 40 EAPSEQLCYVHCHFCDTVLVVSVPSSSLFKTVT 72
5689****************************9 PP
|
| 2 | YABBY | 31.8 | 4.8e-10 | 116 | 139 | 116 | 139 |
YABBY 116 irPPekrqrvPsaynrfikeeiqr 139
+ PekrqrvPsaynrfik+ r
EMT22068 116 GKAPEKRQRVPSAYNRFIKQAAGR 139
589****************87666 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MSSSSSSGAS AAFTPVSQQQ QMASESLSSE LQPPAPMQPE APSEQLCYVH CHFCDTVLVV 60
SVPSSSLFKT VTDEISSANP SLQLLEQHGL GGLVAAAGGR NAAAPAPLPP PPVAGGKAPE 120
KRQRVPSAYN RFIKQAAGRG RGSGPGRQSC TRSRVIHPRQ PWPAGLHCYI HPGNVRDPEA 180
SSPFGRANCV PGHRAVSSVC LRLATPEESS
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AY330228 | 9e-98 | AY330228.1 Triticum aestivum YABBY protein (YAB1) mRNA, complete cds. |
