PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21703
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family FAR1
Protein Properties Length: 739aa    MW: 81840 Da    PI: 5.7548
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21703genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR144.16.7e-14194272190
      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
               +fYn Y+ e+GF +r  ks+++++ g   +++ +C + gk++   k+           r++C+a +++ +++d+ w+vt+ ++ HnH+++
  EMT21703 194 DFYNLYSWEMGFGIRYGKSRRNTKGG-KCMQEITCVNAGKPNMGGKS----------RRCECTALIRLLRTDDNGWYVTQHRKVHNHAFS 272
               6*********************8777.66789**********98877..........9*****************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-9194272IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    Send to blast
MEFSVEEEPR SGAPLALGLG EDAMEAVRRA FPGQDFAIDV VNRAFGWRNP EERSQQDSSA  60
CGISGACTSE KPVDLEQVEN AGKSCAQQDP SASEMQLRSQ EAEQAGQRCD APPAPADVGA  120
EAGGPPAPAD VGAEAGGGWN RRVRRGRIPD EREPDAQRVS ALEKALTGFA ERQTDVVVNP  180
TVGTCFDSIT EAYDFYNLYS WEMGFGIRYG KSRRNTKGGK CMQEITCVNA GKPNMGGKSR  240
RCECTALIRL LRTDDNGWYV TQHRKVHNHA FSTTYGNKVH WPSHKHLDKY TRDLVRQLRH  300
NNVNLGVYDT IASFFGRMEN VPFNKRSIRT LCGEVIREQA DDDARKTMET AAASGERPEN  360
HTGEETTFNC MGLASTTVGS PNMPVDPLRY PEQDDTHSNA EAGRLADLLL AFGDCHLVLK  420
SCTYDDLINS NGTMSGLEEA VKAVTPHLQQ GIFGDLWSRA HNSGGVVSAQ VLTIKDLFRF  480
TRWLTTTTGQ HNLRCVQQRA KLVNSGKAVL EPEQIALLHL YQAENDEYSV KMNKLQGERD  540
AKIAHYMAKI DEARKSFEVS IQAAKQHYPV SASYVALDSN ELRGQCWTMY LAQCRKEAKD  600
LNAKASNIVE KYGPEVIQRH LFEFCSQETN RQALLKYAQT KVNKLKEAGD AREDTLHDYM  660
TLLDIEKAYA LLAAEEQIAN GPDTCGGNED ADHGNRNNTI ARCEAAEGAR GDGQDGGEGA  720
SEGPPRQKRQ RNDQDYVWW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3588740.0AK358874.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1084N18.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020188421.10.0uncharacterized protein LOC109774115
TrEMBLA0A453KBI30.0A0A453KBI3_AEGTS; Uncharacterized protein
TrEMBLM8BIY30.0M8BIY3_AEGTA; Uncharacterized protein
STRINGEMT217030.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6191991
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.13e-10FAR1-related sequence 7