 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
EMT21459 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
Family |
LBD |
Protein Properties |
Length: 177aa MW: 19718.5 Da PI: 7.3707 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT21459 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 140 | 8.1e-44 | 12 | 111 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
+Ca+Ck+lrr+C++dCv+apyfp e+p++fa vh++FGasnv+k+l++lp +r da+sslvyeA ar+rdPvyG++g i+ lqqq++ql+++la++++e
EMT21459 12 PCASCKLLRRRCTRDCVFAPYFPPEDPHRFATVHRVFGASNVSKMLQELPAAQRADAVSSLVYEATARMRDPVYGCAGAISYLQQQVSQLQVQLAVAQAE 111
7***********************************************************************************************9987 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MAGAQTGSSA TPCASCKLLR RRCTRDCVFA PYFPPEDPHR FATVHRVFGA SNVSKMLQEL 60 PAAQRADAVS SLVYEATARM RDPVYGCAGA ISYLQQQVSQ LQVQLAVAQA EILQRINHPS 120 PATAFHLQEL QQRQAQQQQQ MQMDDDDKAY SSLVMQNDLM STLLLQEACL KKESLWT
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | FP100852 | 4e-90 | FP100852.1 Phyllostachys edulis cDNA clone: bphyst013p01, full insert sequence. |