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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT21390 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
HD-ZIP |
Protein Properties |
Length: 218aa MW: 23702 Da PI: 9.7516 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT21390 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 54.9 | 1.5e-17 | 41 | 95 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++k+q +Lee+F+++++++ ++++ LA++lgL rq vWFqNrRa+ k
EMT21390 41 RKKLRLSKDQAAVLEECFKMHSTLNPKQKTALANRLGLRPRQGEVWFQNRRARTK 95
778899***********************************************98 PP
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2 | HD-ZIP_I/II | 120.9 | 6.3e-39 | 41 | 130 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rlsk+q+++LEe+F+++++L+p++K++la++Lgl+prq +vWFqnrRARtk+kq+E+d+e++kr++++l+e+n+rLekev+eLr +l
EMT21390 41 RKKLRLSKDQAAVLEECFKMHSTLNPKQKTALANRLGLRPRQGEVWFQNRRARTKLKQTEVDCEHMKRWCEHLAEQNCRLEKEVAELR-AL 130
69*************************************************************************************9.44 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MRTSTSPESG VSGGIKRGLE RTGSGVFPAA GSDEDEDGGD RKKLRLSKDQ AAVLEECFKM 60 HSTLNPKQKT ALANRLGLRP RQGEVWFQNR RARTKLKQTE VDCEHMKRWC EHLAEQNCRL 120 EKEVAELRAL NAAPPAHSGA ATGPLTTLTM CLSCKRVASS SSASACNVPS FSANSGIGMP 180 MPTPVALPEH RQFFCRFRDT EVTYGGSSGL VKVVKPAR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK358109 | 0.0 | AK358109.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1068P22. |
GenBank | AK359060 | 0.0 | AK359060.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1088I06. |