PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21109
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GeBP
Protein Properties Length: 485aa    MW: 54525 Da    PI: 8.7228
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21109genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573422.7e-13228317297
    DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkv.sksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
               +f+r+ws +De+ +L +l   ++++g+ p+ d  a+++ + ++++ ++  +++l  K+  L++++   +kk   g+    skehd+ ++elsk++W+
  EMT21109 228 AFSRIWSTDDEVRILEALAAHQKQHGTLPQPD--ALVDALAGKLDNRAyGSKELQGKVAALRRRYLLLSKK---GEL--PSKEHDRRVLELSKMVWE 317
               699***********************887775..8999999999887516889****************99...544..5799*************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF527991.32E-3846192IPR029021Protein-tyrosine phosphatase-like
PRINTSPR019112.5E-294663IPR020428Protein-tyrosine phosphatase SIW14-like, eukaryotic
PfamPF031626.6E-5946198IPR004861Protein-tyrosine phosphatase, SIW14-like
Gene3DG3DSA:3.90.190.109.1E-3747192IPR029021Protein-tyrosine phosphatase-like
PRINTSPR019112.5E-298396IPR020428Protein-tyrosine phosphatase SIW14-like, eukaryotic
PRINTSPR019112.5E-29102116IPR020428Protein-tyrosine phosphatase SIW14-like, eukaryotic
PRINTSPR019112.5E-29119133IPR020428Protein-tyrosine phosphatase SIW14-like, eukaryotic
PROSITE patternPS003830141151IPR016130Protein-tyrosine phosphatase, active site
PfamPF045041.0E-18229317IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0035335Biological Processpeptidyl-tyrosine dephosphorylation
GO:0004725Molecular Functionprotein tyrosine phosphatase activity
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MKLEVSPRQR TQEAEQNEGL EAWKHPKQLC ASLGYGEEEE EEVTRMVPPL NFGMVDDGVF  60
RSGFPDAANF RFLASLNLRS VVYLCPEPYP EQNARFLGRS GIKLHHFGIQ GRKEPFVGIP  120
EEMIREALKV ILDVRNHPVL IHCKRGKHRT GCVVGCLRKL QKWRLSSVFD EYLHFAAAKA  180
RKTDQRFMEL FDTSSLEEAP PPPPKLAPKQ APEGRKPQAA AETKKPAAFS RIWSTDDEVR  240
ILEALAAHQK QHGTLPQPDA LVDALAGKLD NRAYGSKELQ GKVAALRRRY LLLSKKGELP  300
SKEHDRRVLE LSKMVWEGGD MASAATASAK VANGQEPKGF EEMCEMYPYL AEQVRQLDAA  360
NPGMFKRQFG MMDEEKARAM DEKIKKQRVA QMKVELRRHD LMVLSMKPML ELQIVPEHAR  420
ISKLGVSLWC KHDETCAGTA NRAGGLRMSS CVAREFWQLV CAEAGLALLA VSDFGCRLEP  480
FLLAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1xri_A2e-81461952151At1g05000
1xri_B2e-81461952151At1g05000
2q47_A2e-81461952151Probable tyrosine-protein phosphatase At1g05000
2q47_B2e-81461952151Probable tyrosine-protein phosphatase At1g05000
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3691530.0AK369153.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2085O11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003573031.20.0uncharacterized protein LOC100824200
TrEMBLM8BGK60.0M8BGK6_AEGTA; Putative tyrosine-protein phosphatase
STRINGEMT211090.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-08DNA-binding storekeeper protein-related transcriptional regulator