PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT20851 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | NAC | ||||||||
Protein Properties | Length: 240aa MW: 27613.1 Da PI: 8.8524 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.2 | 1.5e-10 | 7 | 170 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp..kkvkaeek.ew.yfFskrdkkyatgk.rknra.................... 77 +G+ F+Pt +elv +yL +++ + l vi+e d++++ P+ L +++k + + w +fF+ + ++ + + r EMT20851 7 AGYVFEPTGHELVGHYLMPRAGLGGFFLPGVIEEGvDVLSLRPRALSfpENHKRDYSeVWgFFFTAKLAGETCPTpGAGRCwvqygqekayyggeggreev 107 799**********************98888988755**********6323444433336777777766555432212233234555445555666666565 PP NAM 78 ......tksgyWk..atgkdkevlsk..kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + + +W+ + g++k+ + ++e+v ++ +++ + + ++t+W m+eyrl EMT20851 108 afrhrfAYRYTWRdgEYGQEKAYYGGegGREEVAFRHRFAYRytWRDGEVMSQTRWRMKEYRL 170 55555444455664445556655554555566999999999633234455679********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 13.493 | 5 | 199 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.7E-9 | 7 | 170 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.09E-9 | 7 | 124 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.09E-9 | 160 | 198 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MANLAEAGYV FEPTGHELVG HYLMPRAGLG GFFLPGVIEE GVDVLSLRPR ALSFPENHKR 60 DYSEVWGFFF TAKLAGETCP TPGAGRCWVQ YGQEKAYYGG EGGREEVAFR HRFAYRYTWR 120 DGEYGQEKAY YGGEGGREEV AFRHRFAYRY TWRDGEVMSQ TRWRMKEYRL NRNAAAFRRA 180 HPSAVPADVV FVVHKVYRKP LIPRSPPPPV DSSSSKDEGF ESYILYPRLD ELMRRLTEGN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020158484.1 | 1e-126 | uncharacterized protein LOC109743803 | ||||
TrEMBL | M8CCK6 | 1e-175 | M8CCK6_AEGTA; Uncharacterized protein | ||||
STRING | EMT20851 | 1e-176 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12891 | 22 | 31 |