PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20704
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 317aa    MW: 33869.3 Da    PI: 6.5859
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20704genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.33.2e-14139184555
               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               h ++Er+RR++iN++f eL +++P +     kK++Ka+iL  A++++k+Lq
  EMT20704 139 HIMAERKRREKINQRFIELSTVIPGL-----KKMDKATILSDATRHVKELQ 184
               899***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.574134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.83E-16139188No hitNo description
PfamPF000109.2E-12139184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-18139201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.28E-17139200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-15140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MDDSALFMEW AMDTLEQEHP DPVVVHVNGD SGEAAFPSLQ ALREQRLVFE ELITGANPAS  60
SGSSGETTDG SGGYGGNSPS PAAMEHGVWP LSPNSTRCAP KLCRNGGGGG TNLPVTTWNF  120
SALPASDGTL DSGSAGPDHI MAERKRREKI NQRFIELSTV IPGLKKMDKA TILSDATRHV  180
KELQEKIKAL EAATGRSSRS IETVVLVKKK PRHADAALSD QNASPRSASS STGNPLPEIE  240
VRFSETGVMV RILCHDVQGV VVRVLSEVEE GLHLTVTHAN VMPFTACTVI ITITAKASFP  300
SLISHFRPII HSFTLGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142147ERKRRE
2143148RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3659950.0AK365995.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2039J24.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175444.10.0transcription factor bHLH25-like
TrEMBLR7WGN70.0R7WGN7_AEGTA; Transcription factor bHLH25
STRINGEMT207040.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP92731143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-39bHLH family protein