PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20635
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ZF-HD
Protein Properties Length: 270aa    MW: 30355.1 Da    PI: 8.0948
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20635genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer87.71.2e-272380258
  ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58
                 ++v+Y+eC +NhA + Ggh+vDGCgE+mp  + +  +a + kCaACgCHR+FHR+ + 
     EMT20635 23 QEVKYNECGRNHALASGGHVVDGCGEWMPLGDLNpVDAWSYKCAACGCHRSFHRKVMM 80
                 579***************************9999999******************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257746.0E-142585IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.2E-232578IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015667.5E-232677IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152322.5512778IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.604.1E-21170240IPR009057Homeodomain-like
SuperFamilySSF466891.55E-13171240IPR009057Homeodomain-like
PROSITE profilePS500718.568179243IPR001356Homeobox domain
TIGRFAMsTIGR015654.2E-17181237IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MDVKYPSGSV KKVRQAAVVP AVQEVKYNEC GRNHALASGG HVVDGCGEWM PLGDLNPVDA  60
WSYKCAACGC HRSFHRKVMM ERSPPLPPMV ETVLHGLPQR RKEETPEDRL PGVDSDTNSD  120
GTEYDSDATE YDSEGTEYDD ERSMPRPLQP QPVYHPAQIQ RLPAQLSPAT ASPPHGVMSE  180
RKRSRTTFTT DQKLRMEELS EHLGWHLQKR DKDFIEARCR DIGVSKKVFR NWMNNKKRKY  240
PSGHNPSAAA SSVVGPSHLR LPPPQSHHQC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181134.10.0zinc-finger homeodomain protein 9-like
TrEMBLR7WG520.0R7WG52_AEGTA; Uncharacterized protein
STRINGEMT206350.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36463374
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.18e-32homeobox protein 30