PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20365
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 766aa    MW: 88293 Da    PI: 8.5628
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20365genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.94.3e-141452221598
               -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               + ++p kf+e+++g+   s  +++e ++g+ ++v+   +k+ +++vl++GW  F +  ++keg f+vF+++g+s f  +v +f+
  EMT20365 145 MQTIPQKFVENFKGQ--ISEVIKIEAPDGNIFNVQA--TKNLDKIVLGSGWGVFISFYEVKEGNFLVFRYMGDSHF--KVLIFD 222
               558******999888..6779***************..**********************************9999..887775 PP
2B348.81.3e-153023801498
               T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               + +++p kf++++ g    sk ++le ++g+++++++   +  +++vl++GW  F++a +Lke D +vF+++g+s f  +v +f+
  EMT20365 302 QEISIPEKFVNNFRGR--ISKVMKLEAPDGNVYNIQV--INDLNKIVLRSGWAAFASAYELKEHDLLVFRYIGDSHF--KVLIFN 380
               5699******888766..7899***************..999999****************************9999..888876 PP
3B331.82.5e-105035871095
               HHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
        B3  10 vlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
               ++ sg lv+ k++a+++  ++  ++ +tl +++  + W  +l++    g+ +l+ GW+ Fv  n+L+e D+++F+++++  e ++vv+
  EMT20365 503 TSMSGSLVICKDYAAKYLPDE--DQFITLCHPHKsNIWIDNLKVITD-GSRMLSVGWSCFVLHNELRESDICLFEVSKNdGEVTMVVH 587
               344567***********5443..346888886654999777754333.34489**********************9987566656554 PP
4B352.11.2e-166707571199
               HHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3  11 lksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                ++++l++++kfa++h     +++  l l++ +g++W v++ y    +  +  + W +Fv++n+L+eg ++vF+l++   ++ + v+vfrk
  EMT20365 670 KRNNLLTISRKFAAKHlA--ARSHDILLLRHNRGKKWCVRYYYHSIFR-GFCNSPWTKFVHDNKLREGHICVFELIKGvPKAMMIVHVFRK 757
               467999**********52..33555788999**********5544444.56899**********************888**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.104.0E-15122222IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-16138226IPR015300DNA-binding pseudobarrel domain
CDDcd100175.36E-14140222No hitNo description
SMARTSM010190.04144224IPR003340B3 DNA binding domain
PfamPF023621.5E-11146221IPR003340B3 DNA binding domain
PROSITE profilePS508639.728148224IPR003340B3 DNA binding domain
SuperFamilySSF1019364.32E-20285384IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.0E-19286384IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.702289382IPR003340B3 DNA binding domain
SMARTSM010192.5E-7292382IPR003340B3 DNA binding domain
PfamPF023621.7E-13302380IPR003340B3 DNA binding domain
CDDcd100171.38E-16304380No hitNo description
Gene3DG3DSA:2.40.330.101.7E-15490586IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.59E-17491587IPR015300DNA-binding pseudobarrel domain
CDDcd100171.22E-7494588No hitNo description
PROSITE profilePS5086310.574494590IPR003340B3 DNA binding domain
SMARTSM010190.0021497590IPR003340B3 DNA binding domain
PfamPF023625.7E-8501587IPR003340B3 DNA binding domain
SuperFamilySSF1019364.12E-16652756IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.8E-17653756IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.2E-5659758IPR003340B3 DNA binding domain
PROSITE profilePS5086311.885660758IPR003340B3 DNA binding domain
PfamPF023621.6E-14671757IPR003340B3 DNA binding domain
CDDcd100171.27E-13675756No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 766 aa     Download sequence    Send to blast
MYALLLWAWA SLAFWLLLCR STGSWQRLLF FSGLGAASLQ KYWLVQRASG QRLLYLTFVM  60
APDQYHEQGN RSGHNISSKS FQRCEGCEAH YYWCHMDDTQ KYFFKCMVGN FHDKMASPGA  120
SMPFLSFRWN SIPVQNDNVV VCLFMQTIPQ KFVENFKGQI SEVIKIEAPD GNIFNVQATK  180
NLDKIVLGSG WGVFISFYEV KEGNFLVFRY MGDSHFKVLI FDFGSCCEKE VFHVLVNCGS  240
NAQEKDIHLD QSPLSERRCQ NGGSSNSGSH RRCEHCDVHF YWHHMDDRQK HFLRLMFGDF  300
RQEISIPEKF VNNFRGRISK VMKLEAPDGN VYNIQVINDL NKIVLRSGWA AFASAYELKE  360
HDLLVFRYIG DSHFKVLIFN PSGCEKEVFH IVMNHTPNLP EAGISHDRSF LKETRHRDCE  420
SRDNNSRKTK KMTPLYSPSL RSAEGVTSPE DTLNSGGLRE TTKPRYVLAM GCNLTTVQKA  480
EVNALVRKVR PAIPFYITAM NKTSMSGSLV ICKDYAAKYL PDEDQFITLC HPHKSNIWID  540
NLKVITDGSR MLSVGWSCFV LHNELRESDI CLFEVSKNDG EVTMVVHSLE GAHHLQGKEL  600
ESQKKRRYPV KAEATEDEES DKEHVESNYY YSRHANGLTS DEQEDIFRSE LIQQGNPVYI  660
ALLGKNHLKK RNNLLTISRK FAAKHLAARS HDILLLRHNR GKKWCVRYYY HSIFRGFCNS  720
PWTKFVHDNK LREGHICVFE LIKGVPKAMM IVHVFRKVDG RLALLD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020168823.10.0B3 domain-containing protein LOC_Os12g40080-like
TrEMBLR7WFW40.0R7WFW4_AEGTA; B3 domain-containing protein
STRINGEMT203650.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56234179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-18B3 family protein