PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20201
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 270aa    MW: 28847.3 Da    PI: 6.9883
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20201genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.76.4e-25104162258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnh 58 
                Dg+ WrKYGqK+++gs++pr YYrC+++  gC ++++v+rs e+p +++i Y geH++
  EMT20201 104 ADGFVWRKYGQKDINGSNHPRLYYRCAFRgeGCAATRRVQRSPEEPAAFVIAYYGEHTC 162
               6***************************9999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-2593163IPR003657WRKY domain
PROSITE profilePS5081121.13898165IPR003657WRKY domain
SuperFamilySSF1182903.01E-2398163IPR003657WRKY domain
SMARTSM007742.7E-31103164IPR003657WRKY domain
PfamPF031061.7E-23105162IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MALATPTAVV LELMTMGQQS AAHLGELLRA ASPPVRAEHQ ALAAEIIRCC DRVIAAVSAG  60
ATDKKRKMTD PGATSCHLPS AAMPSKRRVR AAEAHREVQA HTTADGFVWR KYGQKDINGS  120
NHPRLYYRCA FRGEGCAATR RVQRSPEEPA AFVIAYYGEH TCGAGFGDTC QQGAVPPTVV  180
DSGSNARGTV GAIDWNRGSL LLPSLPAEQG ARHHGEAPGD TSRGWLSPSS SSYSSEVELG  240
ASPVGEFLDG SFDWEWETVV NSLRFGDLLQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-161051621068OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186002.10.0probable WRKY transcription factor 46
TrEMBLA0A3B6GW840.0A0A3B6GW84_WHEAT; Uncharacterized protein
TrEMBLR7WCD40.0R7WCD4_AEGTA; Putative WRKY transcription factor 46
STRINGEMT202010.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-18WRKY DNA-binding protein 46