PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT19399 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 247aa MW: 27696.1 Da PI: 6.6219 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 54.4 | 2.5e-17 | 125 | 190 | 3 | 58 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTE........EEEEEES--SS CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkv........veitYegeHnh 58 Dg++WrKYGqK+++g e++rsYYrC+++ +Cp++k +++++++ ++ +++Y g+H++ EMT19399 125 DGHHWRKYGQKNINGREHTRSYYRCAYTerNCPATKTIQQQDHNITInceektakYIVVYYGHHTC 190 9************************99888*********998775542222222257888888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.4E-20 | 109 | 190 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.83E-17 | 117 | 190 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.3E-22 | 123 | 192 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.422 | 125 | 169 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.0E-21 | 125 | 190 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MKSSSTMVVN GGSEMDALFL LTRQQELLTQ LRALILPALR DADGRSADLA ISLFDDVIDC 60 IAGVMSRLEG ISTEAGGRRA GVDVITPNAG ERQEEKPTIS NVGQKRRRNN DKRSRSLITV 120 VPHYDGHHWR KYGQKNINGR EHTRSYYRCA YTERNCPATK TIQQQDHNIT INCEEKTAKY 180 IVVYYGHHTC CDDNTRNGAK NDPGMDLIQN GKMAGAVTEF QKFDPGDVDM PALIEVLDNP 240 ELNWDII |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU669661 | 1e-38 | EU669661.1 Triticum aestivum WRKY31 gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020167912.1 | 1e-166 | probable WRKY transcription factor 70 | ||||
TrEMBL | A0A453ADW0 | 0.0 | A0A453ADW0_AEGTS; Uncharacterized protein | ||||
TrEMBL | R7WFV3 | 0.0 | R7WFV3_AEGTA; Putative WRKY transcription factor 38 | ||||
STRING | EMT19399 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3258 | 30 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 1e-13 | WRKY DNA-binding protein 38 |