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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT19219 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
MYB |
Protein Properties |
Length: 244aa MW: 26476.5 Da PI: 6.2451 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT19219 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEd lv ++q+G +W++ ++ g+ R++k+c++rw +yl
EMT19219 14 RGPWTAEEDMTLVAHIEQHGHSNWRALPKQAGLLRCGKSCRLRWINYL 61
89******************************99************97 PP
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2 | Myb_DNA-binding | 54.3 | 3.1e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T +E+e +++++++lG++ W+tIa++++ gRt++++k+ w+++l
EMT19219 67 RGNFTSDEEEAIIQLHAMLGNR-WSTIAARLP-GRTDNEIKNVWHTHL 112
89********************.*********.************986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 244 aa
Download sequence Send
to blast |
MVRAPCCEKM GLKRGPWTAE EDMTLVAHIE QHGHSNWRAL PKQAGLLRCG KSCRLRWINY 60 LCPDIKRGNF TSDEEEAIIQ LHAMLGNRWS TIAARLPGRT DNEIKNVWHT HLKKRLESSS 120 KPSGQAAPKR KAKKPAVAAS ALEGPTSEPA SSSPGQSLST SSATGYSMAS SLENTGSSSS 180 EEFQIDDSFW SETLAMSADS SGSGMESSDT FGVDSGAPSS SNDEMDFWVT LFMQASDIQS 240 LSQI
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Functional Description ? help
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Source |
Description |
UniProt | Acts as negative regulator of cold tolerance. Negatively regulates beta-amylase genes at the transcriptional level in response to cold stress. Suppresses beta-amylase gene expression by interacting with TIFY11A/JAZ9. Maltose produced by beta-amylases has a role in protecting cell membranes under cold stress conditions in rice and may contribute to the cold tolerance as a compatible solute. {ECO:0000269|PubMed:28062835}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by cold stress and flooding. {ECO:0000269|PubMed:28062835}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF951915 | 0.0 | JF951915.1 Aegilops tauschii clone TaMYB32 R2R3-MYB protein mRNA, complete cds. |