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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT19081 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
MIKC_MADS |
| Protein Properties |
Length: 301aa MW: 34583.4 Da PI: 7.9241 |
| Description |
MIKC_MADS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT19081 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SRF-TF | 77.1 | 1.3e-24 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
+rie+++ rqvtf kR+ g++KKA EL vLCda+v +++fs+tg+lyeys+
EMT19081 9 ERIEDTTSRQVTFFKRKGGLFKKARELGVLCDAQVGILLFSNTGRLYEYSN 59
69***********************************************95 PP
|
| 2 | K-box | 76.6 | 6.8e-26 | 138 | 226 | 10 | 98 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98
+ + ++ ++ e+++L+++++nLq+ +R+llG++L L l+ L+ Le+qLe+s+ +iR +K++l++++ieel kke +++en++L kkl
EMT19081 138 ARRLTQLWKVEANRLRQQLHNLQEDHRQLLGQNLPGLGLEGLKDLENQLETSIHNIRLTKDQLMIDEIEELNKKESLVHQENTELYKKL 226
5566899*******************************************************************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MVRRKTVIER IEDTTSRQVT FFKRKGGLFK KARELGVLCD AQVGILLFSN TGRLYEYSNS 60
TSGVNSIIER YQKVKEGQQF MSASAEAKML WMRAGEWEQA IMHDGVRSSN EATGTMKIDE 120
VAMCGECSRV KNRDALVARR LTQLWKVEAN RLRQQLHNLQ EDHRQLLGQN LPGLGLEGLK 180
DLENQLETSI HNIRLTKDQL MIDEIEELNK KESLVHQENT ELYKKLNIIR RQNLDLQNKL 240
NGQVEVNETI TSSSSQYNIA ARADPVCLQV SHPHHAERDE QPESPTLWYG KVYIFSNLLC 300
L
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