PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18693
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 395aa    MW: 44049.9 Da    PI: 6.7994
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18693genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3322.2e-10291387694
               ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHH.....T--TT-EEEEEE-SS..SEE..EE CS
        B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkan.....gLkegDfvvFkldgr..sefelvv 94 
               ++s++l+++++ +  ++a +  ++ +++++++l++ +g+ We k++    +++s+r +l +GW +F + n     gL +gD+++F+l++   +e ++ v
  EMT18693 291 LNSSSLQKKQFEFGQDYAHAVHLP-AKTTDVILKS-NGKDWETKMSCrkgNNNSNRWMLVSGWGDFMRGNevregGLVDGDMLLFELKSMneKEITMEV 387
               577888888888888888666665.5667888776.9********888899999************88772222255678******9854134444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.105.9E-11280389IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.02E-10282381IPR015300DNA-binding pseudobarrel domain
CDDcd100171.15E-9285389No hitNo description
PROSITE profilePS5086310.419286393IPR003340B3 DNA binding domain
PfamPF023621.1E-8291388IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MAATGPALGA GMRSWSEVRR QATAALASTH AARPRLRGEP AKPFLFARSD PKLTYERWAI  60
LARSAREWSS SEEITFVYAH KTMKSDDLPQ EGPGHDNFLL GRPDIVPIQG HGSLLEYESV  120
EPEDGQSPPE TDCGLILRGC LSGAQSERLN ALIQKVKPET VVFVAVMKNS DVQSPRPLLI  180
ISKERTLVEA AQFPHENGMP VTLQIPDKSE KWHPRFYMEK GEGMLAGGNV SPESDIHGFP  240
HDSLDGKDTH SSEQPSLILP WRTSLTTTQR KIVDEKCQAI GSKYRLYVAT LNSSSLQKKQ  300
FEFGQDYAHA VHLPAKTTDV ILKSNGKDWE TKMSCRKGNN NSNRWMLVSG WGDFMRGNEV  360
REGGLVDGDM LLFELKSMNE KEITMEVHVV PRENL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156200.11e-159B3 domain-containing protein Os03g0619600-like
TrEMBLR7WAM20.0R7WAM2_AEGTA; B3 domain-containing protein
STRINGEMT186930.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP492169