PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18192
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 400aa    MW: 42973 Da    PI: 8.475
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18192genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.51.2e-22168228259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                Dg +WrKYGqK++++s++prsYYrCt+    gC++k++v  s+++p+  +i Y g+H+++
  EMT18192 168 TDGKSWRKYGQKQINDSTNPRSYYRCTHLpdqGCKAKRHVHVSESNPSEYTIDYYGQHTCR 228
               7999************************8888**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-24155230IPR003657WRKY domain
SuperFamilySSF1182902.09E-22161230IPR003657WRKY domain
PROSITE profilePS5081120.862162230IPR003657WRKY domain
SMARTSM007743.5E-27167229IPR003657WRKY domain
PfamPF031068.9E-21169228IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MRCSTAGTLL RHALDTAVDK CGGGIVNEVR EGGGGEGVER QEVWDGVTWL WWRCLCEKEP  60
EWKKRSLRLG RPGRRGSWGV QTVLQESSPE ATLEAGELVD GMMAKLSTAM SVLGTGDVRV  120
ASSSGAGRAP GGRRKRSGAA SFGPHHRSSS RRRMKSPLIK TVTATTLTDG KSWRKYGQKQ  180
INDSTNPRSY YRCTHLPDQG CKAKRHVHVS ESNPSEYTID YYGQHTCRDP STFPSLIVQR  240
AADAAPPPDC GNLISFAPIN GVNNAFTAST SMSAFAHHLM KEASDHHPML FSRFSNYSSS  300
PPAQEGVSSG SPSPACHGKY MQYAGGQFIN VTSLRTSPLT VGSAPAGYWP VVEVTGVEMD  360
AAAGMDSFPS SPSSLGFMSG SLGGSFGNNV YDDDLFSFDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A5e-20161228269OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133154RKRSGAASFGPHHRSSSRRRMK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181740.10.0WRKY transcription factor 6-like
TrEMBLR7W8790.0R7W879_AEGTA; Putative WRKY transcription factor 70
STRINGEMT181920.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125272837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-18WRKY DNA-binding protein 70