PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT17792
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 322aa    MW: 35099.6 Da    PI: 9.1892
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT17792genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY47.43.8e-15135207259
               --SS-EEEEEEE--TT-SS-...........EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefp...........rsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
               +Dg++WrKYG K++ ++ fp           rsYYrC ++   +Cp+kk v+++ ++dp vv +t  ++H+++
  EMT17792 135 NDGFHWRKYGEKKILNAVFPrvacavvnvlgRSYYRCGYSdehRCPAKKLVQQQnNSDPPVVMVTLINDHTCS 207
               7****************9994444444444459*****998889*******8761579*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-18127207IPR003657WRKY domain
SuperFamilySSF1182904.58E-16129207IPR003657WRKY domain
SMARTSM007742.7E-25134208IPR003657WRKY domain
PROSITE profilePS5081110.338135204IPR003657WRKY domain
PfamPF031064.7E-17135206IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MAMRPKSEMS PTPSDQRGAV IEELRKGAQL ADCLRQQLEL IPELGRRNAA LYNVSNISTA  60
LVSSVSMLQS DREQYSCSSD ARAASYAAGA SGAGGSGSGG PRNGAIARTR KARHRRGIHG  120
EELPLKEILT KTPGNDGFHW RKYGEKKILN AVFPRVACAV VNVLGRSYYR CGYSDEHRCP  180
AKKLVQQQNN SDPPVVMVTL INDHTCSSLF PTNNQPPRSS SSATANSQVL DFTTASLSSA  240
VGVSRLKKEE DAGMSVTVPS YTYHELSCYS SLPLLSPMEW ETEMQRLVTS HVHTAHISQP  300
AIWHQLNSHL QVVDGPLKAA LR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177383.11e-152WRKY transcription factor 55-like
TrEMBLR7W7I40.0R7W7I4_AEGTA; WRKY transcription factor 55
STRINGEMT177920.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.16e-15WRKY DNA-binding protein 55