PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT17435
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family FAR1
Protein Properties Length: 439aa    MW: 48762.3 Da    PI: 4.9152
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT17435genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.49.4e-08332424272
      FAR1   2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk....................tekerrtraetrtgCkaklkvkkek 72 
               fYn+Y+  +GF vrk++++    +  g   +  f+C++  k  +e++k                    ++++r++++ + tgC+akl+ +k+ 
  EMT17435 332 FYNNYSCLCGFAVRKASNYCGqtSAGGGESRCIFRCNRARKVLDEEQKkakrqqrkerwqqrtrklapETRKRKRNVIDVTGCQAKLVFTKKM 424
               9****************9976335667788999******9987777667899***************99999****************99886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.0E-5332424IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MAVKNSSKCV VLFSESRNMG DKEQSMCMTF TQKIANEVFY GGDYIGTQPV RSQYPGMWFD  60
PRISQKQCDG VNFLQMIPPY SLAYPVHQIG TSTHPLAVVS NNSVPVTGQQ ATPVVKHKEN  120
ALVLSPGFGM NMSYTQMLLA AESEDPLFGS PHTKYYPVGA ENETFMITGR NTRLSELVDM  180
DNPKSSKYIE QDDPSNWNNN QTDFQEADLA LQTVTWDDGV PAHGAELLQA LGICPGDNQN  240
EDDTCSEDSD TDPSAFNKVL VVGEEDANQV VAGHGDNEVV DDDVNQFSPD DIDNFLENDS  300
VLAAQTCSQE VRSRHVPQMG MDFETSKGAQ AFYNNYSCLC GFAVRKASNY CGQTSAGGGE  360
SRCIFRCNRA RKVLDEEQKK AKRQQRKERW QQRTRKLAPE TRKRKRNVID VTGCQAKLVF  420
TKKMTDGLSQ TSTSSTTMT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195491.10.0uncharacterized protein LOC109781299
TrEMBLR7WCN80.0R7WCN8_AEGTA; Uncharacterized protein
STRINGEMT174350.0(Aegilops tauschii)