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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | EMT16364 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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| Family | WRKY | ||||||||
| Protein Properties | Length: 329aa MW: 36172.1 Da PI: 7.2081 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 61.5 | 1.5e-19 | 285 | 326 | 1 | 41 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers 41
++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v s
EMT16364 285 MNDGCQWRKYGQKISKGNPCPRAYYRCTVAtGCPVRKQVASS 326
58***************************99********866 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:2.20.25.80 | 1.2E-19 | 271 | 325 | IPR003657 | WRKY domain |
| SuperFamily | SSF118290 | 1.44E-17 | 278 | 326 | IPR003657 | WRKY domain |
| PROSITE profile | PS50811 | 20.094 | 280 | 329 | IPR003657 | WRKY domain |
| SMART | SM00774 | 1.1E-13 | 285 | 329 | IPR003657 | WRKY domain |
| Pfam | PF03106 | 6.0E-17 | 286 | 325 | IPR003657 | WRKY domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 329 aa Download sequence Send to blast |
MDDENHELTE IWSESDSLLD ERVSRSIIVG PGDADAEDED SREASSTPEG ARQQQHVAHV 60 EAYSTHMRDD HRASEGNFFK FLQNQSSTKK EAQEDKIAST RAEMGEVRKE NERLKTMLSR 120 MVENHRSLQK QFDVLHQQGR GKNLVVGSPA HTSLSNDVKE PGFISLRLGT SAGTSRQSMG 180 EKIKRGINNP EGRDMSLELS PGCKAVGAAG QSETKVRRDV LMLSPGGSSE EEAVETTTTS 240 AAASKMVKNP RSTGSGVETE DEVAQQPLPK KARVSVRARC DTPTMNDGCQ WRKYGQKISK 300 GNPCPRAYYR CTVATGCPVR KQVASSIYN |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020191156.1 | 1e-179 | probable WRKY transcription factor 72 | ||||
| TrEMBL | N1QZB0 | 0.0 | N1QZB0_AEGTA; Putative WRKY transcription factor 72 | ||||
| STRING | EMT16364 | 0.0 | (Aegilops tauschii) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP5047 | 38 | 62 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G15130.1 | 5e-34 | WRKY DNA-binding protein 72 | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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