PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

EMT16364

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

WRKY

Protein Properties

Length: 329aa MW: 36172.1 Da PI: 7.2081

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT16364	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	61.5	1.5e-19	285	326	1	41
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers 41 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v s EMT16364 285 MNDGCQWRKYGQKISKGNPCPRAYYRCTVAtGCPVRKQVASS 326 58*************************99******866 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.2E-19	271	325	IPR003657	WRKY domain
SuperFamily	SSF118290	1.44E-17	278	326	IPR003657	WRKY domain
PROSITE profile	PS50811	20.094	280	329	IPR003657	WRKY domain
SMART	SM00774	1.1E-13	285	329	IPR003657	WRKY domain
Pfam	PF03106	6.0E-17	286	325	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence Send to blast
MDDENHELTE IWSESDSLLD ERVSRSIIVG PGDADAEDED SREASSTPEG ARQQQHVAHV 60 EAYSTHMRDD HRASEGNFFK FLQNQSSTKK EAQEDKIAST RAEMGEVRKE NERLKTMLSR 120 MVENHRSLQK QFDVLHQQGR GKNLVVGSPA HTSLSNDVKE PGFISLRLGT SAGTSRQSMG 180 EKIKRGINNP EGRDMSLELS PGCKAVGAAG QSETKVRRDV LMLSPGGSSE EEAVETTTTS 240 AAASKMVKNP RSTGSGVETE DEVAQQPLPK KARVSVRARC DTPTMNDGCQ WRKYGQKISK 300 GNPCPRAYYR CTVATGCPVR KQVASSIYN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020191156.1	1e-179	probable WRKY transcription factor 72
TrEMBL	N1QZB0	0.0	N1QZB0_AEGTA; Putative WRKY transcription factor 72
STRING	EMT16364	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5047	38	62

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	5e-34	WRKY DNA-binding protein 72