 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EMT16225 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
G2-like |
| Protein Properties |
Length: 293aa MW: 32636.9 Da PI: 6.3175 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT16225 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 104.1 | 8.4e-33 | 26 | 80 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+rlrWtp+LH+rFv+av++LGG++kAtPk +l+lm +kgLtl+h+kSHLQkYRl
EMT16225 26 KQRLRWTPDLHDRFVHAVARLGGPDKATPKGVLRLMAMKGLTLYHLKSHLQKYRL 80
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MEGMSYGGGA AGAGAGAAAL SPRDPKQRLR WTPDLHDRFV HAVARLGGPD KATPKGVLRL 60
MAMKGLTLYH LKSHLQKYRL GKQSKKSTDL ELANSGDFTT QDINFQIGAP LVVPAERDTG 120
RADLSAIIRH LEINNNYFCL HGLEIPLEDT LRYQIQVQRE LCEQLEVQKK LQMRIEAQGR 180
YLKEILEKAQ ENISFDANGS VGLENTRSQL TDFNLALPGL SDNGTQVYEE SGEQLVKHMS 240
DDNLHDNNLD FQLYRVRSQE AKSVECTPKT EDLLLLDLNI KGGYDLSSRG MQG
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 4e-21 | 26 | 82 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 4e-21 | 26 | 82 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 4e-21 | 26 | 82 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 4e-21 | 26 | 82 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK371512 | 1e-158 | AK371512.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2136B23. |
