 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT15399 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
bHLH |
| Protein Properties |
Length: 188aa MW: 19731 Da PI: 5.0644 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT15399 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 33.1 | 1e-10 | 123 | 152 | 2 | 31 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkas 31
r++h ++Er+RR+++N+ ++ Lr+l+P+++
EMT15399 123 RMTHIAVERNRRKQMNEYLAALRSLMPPSY 152
99*************************974 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MALEAAVLSR AAAGLFGRCA MAGAGGAWNG LFGGSEGLAG LDGGDWDAAV AAACSSMLLP 60
PAAFQDLDIS ATAPQEESGG RGEMSAAGVG QHDAAPVTAA ATGRRKRRRT RTAKNSEEGE 120
SHRMTHIAVE RNRRKQMNEY LAALRSLMPP SYALRVEDDC QLTSVDEIAT AAHQIIEKIQ 180
EEQDFTSA
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 104 | 108 | RKRRR |
| 2 | 104 | 109 | RKRRRT |
| 3 | 122 | 133 | RMTHIAVERNRR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP005399 | 1e-56 | AP005399.3 Oryza sativa Japonica Group genomic DNA, chromosome 9, PAC clone:P0676H02. |
| GenBank | AP005574 | 1e-56 | AP005574.3 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:OJ1595_D08. |
| GenBank | AP014965 | 1e-56 | AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012617 | 1e-56 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |
