PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT15033
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 288aa    MW: 31533.3 Da    PI: 6.3427
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT15033genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.81.6e-2190151258
               --SS-EEEEEEE--TT-SS-EEEEEE-ST....T---EEEEEE-S.SSTTEEEEEEES--SS CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa....gCpvkkkversa.edpkvveitYegeHnh 58 
               dDg+ W KYGqK+++gs++pr+Y+rC+++    gCp++++v+rs+ +dp + + tY  +H++
  EMT15033  90 DDGFVWTKYGQKDIRGSNHPRHYFRCAYTldagGCPARRQVQRSEeHDPPLYVLTYFADHTC 151
               8**************************9999999*********973699***********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-2181151IPR003657WRKY domain
SuperFamilySSF1182902.09E-1987151IPR003657WRKY domain
SMARTSM007743.9E-2689153IPR003657WRKY domain
PfamPF031061.2E-2290151IPR003657WRKY domain
PROSITE profilePS5081119.24490149IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MAQGRKSAAA LEALLQVQDD HAGIRELAAE ILSCCDRALA ALHGKPAGRK KRKLGPQSAA  60
TETTRHKRRT RTTSGETAAA TRVERKQNWD DGFVWTKYGQ KDIRGSNHPR HYFRCAYTLD  120
AGGCPARRQV QRSEEHDPPL YVLTYFADHT CCHGAEAAFA ALDDVKILDF GCVGSRSPRP  180
DDGDARKTSL SEELPAEVAK VEPPAEVAKV ESTPLPDMRP AGKVAELSSS TDEIHCSSSW  240
ESAAVCSDWD FFGNCSFDYV GEFFDVEDIF VPIACFTCAN ALLPSVKH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-1587151668OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195143.10.0probable WRKY transcription factor 62
TrEMBLR7W4Z60.0R7W4Z6_AEGTA; Putative WRKY transcription factor 62
STRINGEMT150330.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP46632667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.12e-19WRKY DNA-binding protein 62