 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT14569 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
NAC |
Protein Properties |
Length: 402aa MW: 44356.6 Da PI: 4.6131 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT14569 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 91.7 | 1.2e-28 | 24 | 158 | 2 | 126 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlsk.kgel 99
pG+rF Ptd+el+ +yL+ k++g++ ++ + +++ d+y +P+ L +++ + + wy F++r++kya+g r++r+t +g+Wk+ gk+++v+ ++++
EMT14569 24 VPGVRFVPTDQELILFYLRSKLRGDPPPT-SLVRDDDVYAEHPQILTTRLGPSVEdYWYVFTQRSRKYAKGGRPSRSTGdTGRWKSVGKNTPVTYGkEKAT 123
59************************999.88**************96555444449*******************66549************98646777 PP
NAM 100 vglkktLvfy........kgrapkgektdWvmhey 126
+g +++L++ + ++++ ekt+W m e+
EMT14569 124 IGFRNSLAYEvfvyddggDSKKKRIEKTEWKMMEF 158
*******9987778877667888899********9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MLLDASPSSQ QQPGEAPLYP YLHVPGVRFV PTDQELILFY LRSKLRGDPP PTSLVRDDDV 60 YAEHPQILTT RLGPSVEDYW YVFTQRSRKY AKGGRPSRST GDTGRWKSVG KNTPVTYGKE 120 KATIGFRNSL AYEVFVYDDG GDSKKKRIEK TEWKMMEFVD VDSNRPVSSD SNFMLLNDWV 180 LCRITRKPEK KKGEEEDPGA SPADEVVEEE EEHEPSSMML VDEPLTDTSP DTSQQAQATA 240 PTGLLRNGAN WSDSTADSQV QGSGSGSGAD PQQTADDDPF DLPDLEPSLS VNSFDHAFGF 300 RPDPWAWNLY YQEATDTDSP GSRLRTPSDP DPIEPPSEPP AAPQPRDVVT DPPSSADDGR 360 LEHAKAIRKR KEHARASGDD AGKKGNAAVK KSSGRAKQDG QN
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-18 | 25 | 187 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-18 | 25 | 187 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-18 | 25 | 187 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-18 | 25 | 187 | 19 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 1e-18 | 25 | 187 | 19 | 165 | NAC domain-containing protein 19 |
4dul_B | 1e-18 | 25 | 187 | 19 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |