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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT14404 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 492aa MW: 51404.5 Da PI: 7.59 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.3 | 1.8e-29 | 242 | 301 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+H h+ EMT14404 242 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHSHP 301 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.3E-31 | 227 | 303 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.41E-27 | 235 | 303 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 27.772 | 237 | 303 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.0E-35 | 242 | 302 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.0E-26 | 243 | 301 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006952 | Biological Process | defense response | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence Send to blast |
MDVAVERPPP VKEENKPDTM EIASALPMVL ESFPSTQRNS TTTSKDDKLE ATKAEMGEVR 60 EENERLKTLL SHIVRDYQSL QTHFQDAVKV KHQAPAADKL PAAPAPAPTA TTDDLVSLCL 120 GSGGYARPKG AHQRSLSSSS SGTETDPDDQ LSLGLSSRRS TDGDDRQAAR PSATPLMNLS 180 SDSSADDDAA PGHQLPAAAC PPATKARKSP GAGVDGADDE VLQQQAKKAR VSVRVKCDTP 240 TMNDGCQWRK YGQKISKGNP CPRAYYRCTV APSCPVRKQV QRCADDMSIL ITTYEGTHSH 300 PLPPAAAAMA STTSAAASML LAGSSSSSSH GHHLPFPSAG LLGPTTISTI ASCPTVTLDL 360 TAPHSLMQQQ YQSPYAAGYE SKALPAAWSS GYLAPYAGGL PYYGKSSLPA MGQHFGLGMA 420 TTRAEQLYGA AHSSSYLQRT SSVGVVHGAP AAAPAVTDTI AKAITSDPSF QSVLAAAITS 480 YMGRGAGAAA HK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-20 | 229 | 305 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 226 | 235 | KKARVSVRVK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK368042 | 0.0 | AK368042.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2066P22. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020189817.1 | 0.0 | probable WRKY transcription factor 72 | ||||
TrEMBL | A0A453E754 | 0.0 | A0A453E754_AEGTS; Uncharacterized protein | ||||
TrEMBL | R7W9B4 | 0.0 | R7W9B4_AEGTA; Putative WRKY transcription factor 72 | ||||
STRING | EMT14404 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12081 | 29 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 6e-60 | WRKY DNA-binding protein 72 |