PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT14095
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 354aa    MW: 39472.1 Da    PI: 6.435
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT14095genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1676.3e-52121391128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
               lppGfrFhPtdeel+v+yL +++++ + ++  +i+ev+iyk++PwdLp k+  +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++ls+  +e +
  EMT14095  12 LPPGFRFHPTDEELIVHYLGRQAASMPSPV-PIIAEVNIYKCNPWDLPGKALFGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKAILSTpANESI 111
               79*************************999.88***************8777899**************************************9988899* PP

       NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
               g+kk Lvfy+g+ pkg+ktdW+mheyrl
  EMT14095 112 GVKKALVFYRGKPPKGVKTDWIMHEYRL 139
               **************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-645167IPR003441NAC domain
PROSITE profilePS5100560.62912167IPR003441NAC domain
PfamPF023653.0E-2613139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009617Biological Processresponse to bacterium
GO:0009825Biological Processmultidimensional cell growth
GO:0009835Biological Processfruit ripening
GO:0009908Biological Processflower development
GO:0010150Biological Processleaf senescence
GO:0045087Biological Processinnate immune response
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MPMGSSAAMP ALPPGFRFHP TDEELIVHYL GRQAASMPSP VPIIAEVNIY KCNPWDLPGK  60
ALFGENEWYF FSPRDRKYPN GARPNRAAGS GYWKATGTDK AILSTPANES IGVKKALVFY  120
RGKPPKGVKT DWIMHEYRLT AADNRTTKRR GSSMRLDDWV LCRIHKKCGN LPNFSSSDQE  180
QEHEQESSTV EDSQNNHTVS SPKSEAFDGD GDDQLQLQQF RPMAIAKSCS LTDLLNTVDY  240
AALSHLLLDG AGASSSDAGA DYQLPPENPL IYSQPPWQQT LHYNNNNGYV NNDTIDVPQL  300
PEAHVDDYGM NGDRYNGMKR KRSSGSLYCS QLQLPADQYS GMLIHPFLSQ QLHM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-731216715168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence and reduces fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. {ECO:0000269|PubMed:29760199}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00221DAPTransfer from AT1G69490Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. {ECO:0000269|PubMed:29760199}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY6256820.0AY625682.1 Triticum aestivum NAC domain transcription factor (NAC69-1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020166974.10.0NAC transcription factor 29-like
SwissprotK4BWV25e-85NAP1_SOLLC; NAC domain-containing protein 1
TrEMBLA0A3B6MMY50.0A0A3B6MMY5_WHEAT; NAC transcription factor 29
TrEMBLA0A453KCW30.0A0A453KCW3_AEGTS; Uncharacterized protein
TrEMBLN1QYV50.0N1QYV5_AEGTA; NAC domain-containing protein 29
STRINGEMT140950.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38033775
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-81NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Ma X, et al.
    The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato.
    Plant Physiol., 2018. 177(3): p. 1286-1302
    [PMID:29760199]