PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13722
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 336aa    MW: 37028.8 Da    PI: 4.5412
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13722genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.81e-23201581127
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee..vikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgk...rknr.atksgyWkatgkdk 90 
               lppG+ F+P +ee+v  yL+  ++g+ ++ +e  v+ e d+y  +P  L +     +++ ++ +w+f ++ + ++++g    r  r +++ g+Wk   ++k
  EMT13722  20 LPPGVYFNPMNEEIVRTYLNGWIAGHGTSGAEaaVVIEEDVYGDKPDVLARrhlpaSTRDSDPSWWFRCHCKVQATRGGaahRGDRsVATGGFWKLEQTTK 120
               79***********************99554331158888*********9743565444456669999999888888665223666656779********** PP

       NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
               ev ++ +ge+ g k+t+ fy +++ + ekt+W+m+ey+
  EMT13722 121 EVRCEaDGEHLGFKRTFGFYVEHEGEKEKTRWLMEEYT 158
               **99889999**********9999999**********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-2611180IPR003441NAC domain
PROSITE profilePS5100528.49120185IPR003441NAC domain
PfamPF023652.3E-1421158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MALPARDDYE YEYLTPALAL PPGVYFNPMN EEIVRTYLNG WIAGHGTSGA EAAVVIEEDV  60
YGDKPDVLAR RHLPASTRDS DPSWWFRCHC KVQATRGGAA HRGDRSVATG GFWKLEQTTK  120
EVRCEADGEH LGFKRTFGFY VEHEGEKEKT RWLMEEYTNV DSPDEGTVRN DGKNVLPALY  180
RIYLTPRDPG KKKRKQSGRD VGDDYDDVDG GPVKAARVKV PNAYLHAIAA LLSPSSVRGA  240
GQEEPQGGVE APPPPSGVFS EYRGEAASSD DDDHGMTMNE NLLEEAQGST GGDDSPEMRV  300
LVTMNDGGIP AWEMGMGGGY VFADTSWIYE HYQNTE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185194PRDPGKKKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020161467.11e-172NAC domain-containing protein 48-like
TrEMBLA0A3B6TBK40.0A0A3B6TBK4_WHEAT; Uncharacterized protein
STRINGEMT137220.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP135701724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.14e-14NAC domain containing protein 64