PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13710
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 365aa    MW: 39545.1 Da    PI: 4.6312
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13710genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.81.1e-19131365128
       NAM   5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
               +r  Pt+ e v++yL + ++g++l+ ++  i++v+i  +eP+dL +       +   ++ + +fF++ ++k  ++ ++ r + +g+W+ + k++e+++  g
  EMT13710  13 YRLCPTEVEAVTYYLPRLLSGETLHGADKlIHRVEISGCEPKDLAAryapapqA--VSSGDRFFFTTCKSKRGSNLQSVRGAGAGTWSIQ-KTTEICH-AG 109
               5789*******************7776666**************8534554321..234477******************99*****976.6688888.89 PP

       NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                +vg  k L f     +kg++t Wvm+eyr 
  EMT13710 110 VKVGEVKNLSFK----KKGKSTGWVMEEYRC 136
               9**********8....78899********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.2639156IPR003441NAC domain
PfamPF023653.3E-1213135IPR003441NAC domain
SuperFamilySSF1019411.96E-2013154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MEGLDVDDVF HHYRLCPTEV EAVTYYLPRL LSGETLHGAD KLIHRVEISG CEPKDLAARY  60
APAPQAVSSG DRFFFTTCKS KRGSNLQSVR GAGAGTWSIQ KTTEICHAGV KVGEVKNLSF  120
KKKGKSTGWV MEEYRCLLPE ATVSDGVKVF CKMHLAQHAP DAARQESEAY KLQQQQPEAV  180
TPSTHAQKRP APAAAADPHP PRPKKRMRGA GPVPAPVVLD YAQASCESTT TSSRSDVAQA  240
PEISSQSDVL ESTQSVPEAG SSIARSTSEE GVFEPLGPIS DLPDGDEDGF DLEELMRMME  300
DDLIEVEPAT GANTGVEMGQ QEPLYLDALD QGVLEGMLQS DYPAFHDADK DKRYNTAPDL  360
DAPSL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3732720.0AK373272.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3025L12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197295.10.0uncharacterized protein LOC109783104
TrEMBLR7W6T70.0R7W6T7_AEGTA; Protein CUP-SHAPED COTYLEDON 3
STRINGEMT137100.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.16e-15NAC domain containing protein 58