PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT13602 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 309aa MW: 33527.8 Da PI: 7.6906 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.9 | 1.6e-11 | 206 | 254 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 k+ +rk++NR +ArrsR RK a ++eLee v L N +L l + EMT13602 206 KANKRKESNRDSARRSRSRKAAHTKELEEQVSLLRVANNSLMRHLADVS 254 899************************************9987776555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.1E-9 | 202 | 266 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.048 | 204 | 256 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.7E-10 | 204 | 278 | No hit | No description |
Pfam | PF00170 | 2.4E-9 | 206 | 252 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.04E-9 | 206 | 258 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence Send to blast |
MEPVFFSLEE AMREPDPNPC RTSSPPLEAH VLAGGLGGVG AGKVVGGGAT EWCFHESVDE 60 PWLLNVPTAP VANPEASTLY PNPTAEGSRK RRHDVHEMVG AVEVIPTPPA ASPVVDPVAY 120 NAMLRRKLDA HLAAVAMLRT TPGICRQSSH DNGASQNPDS IQGSENHTGD VSVHQLSSSS 180 LEPSPSDGDM EGEAQTIGTM HISAEKANKR KESNRDSARR SRSRKAAHTK ELEEQVSLLR 240 VANNSLMRHL ADVSQRYVNI SIDNRVLKAN VETLEAKVMR AIQKVARTSQ TIKATVQTKY 300 EQKLICPRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | Y09013 | 0.0 | Y09013.1 T.aestivum mRNA for transcriptional activator. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020187695.1 | 1e-168 | basic leucine zipper 63-like isoform X1 | ||||
TrEMBL | N1QUX9 | 0.0 | N1QUX9_AEGTA; Regulatory protein opaque-2 | ||||
STRING | EMT13602 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP25202 | 5 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.1 | 6e-17 | bZIP family protein |