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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT13570 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
WRKY |
| Protein Properties |
Length: 507aa MW: 54680 Da PI: 6.1185 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT13570 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 101.5 | 5e-32 | 180 | 237 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK++kgse+prsYY+C++agCp+kkkve++ d++v+ei+Y+g+Hnh+k
EMT13570 180 DDGYNWRKYGQKQMKGSENPRSYYKCSFAGCPTKKKVEQAP-DGQVTEIVYKGTHNHPK 237
8****************************************.***************85 PP
|
| 2 | WRKY | 106.7 | 1.2e-33 | 344 | 402 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct+++Cpv+k+ver+++d ++v++tYeg+Hnh+
EMT13570 344 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTPNCPVRKHVERASQDLRAVVTTYEGKHNHD 402
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 507 aa
Download sequence Send
to blast |
MAMTPPPSSF PPPSPSSYFN MSSGFLDSSA LLSPSLFASP TTGAFPSHQF NWMGTPENDG 60
LQGSATQDEQ RQYSGFTFQT TAPPPAVTTM ATTSFLQSSM PMAQLVGDSY EQQQQPWSYQ 120
DTGMNGGTRP AEFTTQFEPP TTSTIMATTA PDVLGNGAYS VPVPSGTAGY RVQSRRPSSD 180
DGYNWRKYGQ KQMKGSENPR SYYKCSFAGC PTKKKVEQAP DGQVTEIVYK GTHNHPKPQN 240
PRRGSGSAVS SSYALQCHGA NDASSDALSG TPENSSASYG DDETNGVSSR LAGAVGGGED 300
QFDDEEPDCK RWRSDGEATI MAVGNRTVRE PRVVVQTMSD IDILDDGYRW RKYGQKVVKG 360
NPNPRSYYKC TTPNCPVRKH VERASQDLRA VVTTYEGKHN HDVPAARGSA AAAARYRAAT 420
LQPAAMALQG AGGYSSLRPD GFGGVDGGGA PAEMSGFALS GFGNPSYSYA SMQEQQQQRQ 480
SDAMYYDASR TKDEPRDDMF FGHSLMF
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK376482 | 0.0 | AK376482.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3125H17. |
