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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT13393 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
AP2 |
Protein Properties |
Length: 426aa MW: 47611.1 Da PI: 8.8938 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT13393 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 40.5 | 6.7e-13 | 11 | 67 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g
EMT13393 11 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 67
57*******************6666777775555599******************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0016021 | Cellular Component | integral component of membrane |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 426 aa
Download sequence Send
to blast |
MTPCAAGKRS SIYRGVTRHR WTGRYEAHLW DKSTWNQNQN KKGKQGAYDD EEAAARAYDL 60 AALKYWGAGT QINFPVSDYT RDVEEMQMIS KEDYLVSLRR KSSAFSRGLP KYRGLPRQLH 120 NSRWDASLGQ LLGNDYMNLS CGKGIALDGK FAGSFGLERK IDLTNYIRWW VPKKTRQSDI 180 SKAEEVADEI RAIEGSVQLT EPYKLPSLGL GSHSNPSSAG LSACSILSQS GAFKSFLEKS 240 TKLSEECTFS KEIDEGKGVV SVPTTGHHTS PVDINMNGLL VQRAPYTLAP VMPTPMKSTW 300 SPADPSADHL FWSNFILPSS QPVTMATITT TTDVRLSILT DSPGEYPFWD ALTASNLMPV 360 RLMLTTSFTS GVFRAANLLM WWLVSNTLCI NTSQNMHRRF EEENRNRNVI FVCLVAYLVQ 420 IFGLLS
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK355749 | 0.0 | AK355749.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1025C06. |