PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13314
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 297aa    MW: 32876.4 Da    PI: 9.6421
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13314genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.44.7e-091889168
       NAM  1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkky 68
              lp+G++F+Ptd+el+ e+L+ k++ ++      ++++  +i+   +i++++P++Lp  v  + ++ y F+  + +y
  EMT13314 18 LPAGVKFDPTDQELL-EHLEGKARPDTrklhplIDEFIpAIEGEnGICYTHPERLPG-V--HLRSPYAFALVHDTY 89
              799************.99****999985665543333334766657*********93.2..234456666555555 PP
2NAM66.95.6e-2114021758128
       NAM  58 wyfFskrdkkyatgkrknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                +fF++ +k+y+tg+rk+r+++      + +W++tgk+++v++ +g+l+g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  EMT13314 140 RHFFHRPSKAYTTGTRKRRKVHtdeqggETRWHKTGKTRPVFT-DGKLKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 217
               49*****************744456555778************.99************6657999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.29E-10882IPR003441NAC domain
PROSITE profilePS5100523.918236IPR003441NAC domain
PfamPF023654.7E-1419217IPR003441NAC domain
SuperFamilySSF1019411.06E-21136232IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045492Biological Processxylan biosynthetic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000652Biological Processregulation of secondary cell wall biogenesis
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MTGFSWNAAA TIQDLPGLPA GVKFDPTDQE LLEHLEGKAR PDTRKLHPLI DEFIPAIEGE  60
NGICYTHPER LPGVHLRSPY AFALVHDTYN SMKVAFQMVF SFYKHLCARV SGALIAPQIP  120
FATRLFTLFV SGVGKDGLIR HFFHRPSKAY TTGTRKRRKV HTDEQGGETR WHKTGKTRPV  180
FTDGKLKGYK KILVLYTNYG KQRKPEKTNW VMHQYHLGSD EEEKDGELVV SKDGHNNNML  240
KEAAGMVDFY SPTAAALIGY GSQVAPPNNR AAAAAAAASA HLMPNFEVHT GGTGFGP
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3596311e-150AK359631.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1100E16.
GenBankAK3700351e-150AK370035.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2103P15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020160558.11e-101NAC domain-containing protein 73
SwissprotQ9M0F89e-59NAC75_ARATH; NAC domain-containing protein 75
TrEMBLR7W7L80.0R7W7L8_AEGTA; NAC domain-containing protein 8
STRINGEMT133140.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30753786
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-60NAC domain containing protein 75
Publications ? help Back to Top
  1. Droc G, et al.
    OryGenesDB: a database for rice reverse genetics.
    Nucleic Acids Res., 2006. 34(Database issue): p. D736-40
    [PMID:16381969]
  2. Sakamoto S,Mitsuda N
    Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant.
    Plant Cell Physiol., 2015. 56(2): p. 299-310
    [PMID:25535195]