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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT12694 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 367aa MW: 39205.2 Da PI: 7.0633 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 60.6 | 2.8e-19 | 125 | 188 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSS...TTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaed...pkvveitYegeHnhe 59 +Dgy+WrKYGqK++++ +f+r YY+C ++ gC++kk v+++++ ++++tY +eH+++ EMT12694 125 SDGYQWRKYGQKNIQNRKFARCYYKCMFShdrGCRAKKTVQQQDTSsgrRPMFQVTYVNEHKCQ 188 7*************************8877799*******998765211569**********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.2E-22 | 117 | 189 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-19 | 120 | 189 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.6E-25 | 124 | 189 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 14.998 | 125 | 190 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-21 | 126 | 188 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence Send to blast |
MPQFEEMTFG QEAIEKLSQE LVGGYDLNAR LLALLRRGPL DGRGQEAAVA MSQELSRVFM 60 VSLFMLRPGD SNRMAAPGAA ITEGGIDQRT PTNDIPICGG EEVAPTRKGR GNGVTGKEIT 120 ASPHSDGYQW RKYGQKNIQN RKFARCYYKC MFSHDRGCRA KKTVQQQDTS SGRRPMFQVT 180 YVNEHKCQQE AVLPRESIGG NKHTTSSGHF DPQRAKLDDD VMASCLAMVI GGATPAGLSS 240 LSSPPPVVRA SPSAPAGGRT PSLLGVSMGL DETTVAEISC RSPFAPVKAP AAPSSSSLPV 300 EAINSSDPTP AGGGLPGSTE AMAMDEIYFP CGPPFSPFPA QSSIHSVDVP MAVARFTDTD 360 SPWPYYS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020166695.1 | 1e-166 | probable WRKY transcription factor 47 | ||||
TrEMBL | M8C0U4 | 0.0 | M8C0U4_AEGTA; Putative WRKY transcription factor 41 | ||||
STRING | EMT12694 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13243 | 26 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.2 | 2e-16 | WRKY family protein |