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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT12444 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
MYB |
Protein Properties |
Length: 265aa MW: 29174.1 Da PI: 6.1563 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT12444 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 44.7 | 3.1e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++lv +G +W+ +++ g+ R++k+c++rw +yl
EMT12444 14 KGPWTAEEDQKLVGFLLTHGHYCWRVVPKLAGLLRCGKSCRLRWTNYL 61
79******************99**********99************97 PP
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2 | Myb_DNA-binding | 54.6 | 2.5e-17 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+ eE++l +d+++qlG++ W++Ia+ ++ gRt++++k++w+++
EMT12444 70 LSDEEQQLVIDLHAQLGNR-WSKIAAQLP-GRTDNEIKNHWNTH 111
589****************.*********.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MGRQPCCDKV GLKKGPWTAE EDQKLVGFLL THGHYCWRVV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SDEEQQLVID LHAQLGNRWS KIAAQLPGRT DNEIKNHWNT HIKKKLRKMG 120 IDPVTHRPLD QEAPPPAQQT TPPPPTSTAW QQLDGAERSQ QAEDEDVKAV PLIQPQEIRA 180 PPPTASSNCS VSPASVISPA CSSSSAASGL EAAEWPEPMY LLGMDGIMDV GSGWDAGFVV 240 PCGLGVDPFD HYYPDPAGFD QEAWP
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as positive regulator of abscisic acid (ABA) signaling in response to salt stress. Acts as negative regulator ABI1, ABI2 and PP2CA, which are protein phosphatases 2C acting as negative regulator of ABA signaling. Binds to the DNA specific sequence and core element 5'-ACGT-3' found in the promoters of ABI1 and PP2CA to negatively regulate their expression during ABA-dependent salt stress response. {ECO:0000269|PubMed:23660402}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salt stress, drought stress and abscisic acid (ABA). Down-regulated by salicylic acid (SA) methyl jasmonate (JA). {ECO:0000269|PubMed:23660402}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT008981 | 0.0 | BT008981.2 Triticum aestivum clone wdk2c.pk006.d4:fis, full insert mRNA sequence. |