PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT12426
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 417aa    MW: 45169.9 Da    PI: 9.7241
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT12426genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.5e-08111158555
               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               h  rEr RR+r+ ++++ +r llP+    +++   K  +L  Av+YI++L+
  EMT12426 111 HITRERLRRERLSQGYADIRALLPPG---RAPNGAKNFVLAAAVDYIRELE 158
               889**********************8...89999999***********996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.204106157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-10110172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.5E-6111158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-9111173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.008112163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MDEWFFSVDR DDDDDLLSLM GLLSPPPAVV HQGSAFAPYQ RRSTATSLLV SPGRRQRARG  60
RANAHRSMHE YLRRMNGLES SPQGTSSGAR AAPPAKEPIE PQVPRSSAFR HITRERLRRE  120
RLSQGYADIR ALLPPGRAPN GAKNFVLAAA VDYIRELEGR KGRLGARHAE LVRSSESDGA  180
SGGGMVVKVR GEGGCSSMVG ALEAVLRRLK AMQELRVTEI RSWCCDGAMC MDVAVAVEST  240
VSSFEVDMRI TNALMELEEI KSGRLQDAVK RSSNFSCQVV SGEAQTAPIL AVFGPLKQSF  300
HIIIRKNKPD KYCPLLIALA LSRKFSVMPS GSGAAGLSSS HDGGGMVVNV RGEGGCPSMA  360
GVLQAAVLRR LKAMQELRVT AIRSCSCDIV ICMDVRVEPT VSSFEVDMRI TNAFPAK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115120RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-135HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020170577.10.0transcription factor BHLH148-like
TrEMBLM8BEN40.0M8BEN4_AEGTA; Uncharacterized protein
STRINGEMT124260.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127302432