PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

G2-like

Protein Properties

Length: 363aa MW: 39629.8 Da PI: 7.3232

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT11720	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.8	3.7e-31	94	147	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG+++AtPk +l+lm+v gL++ hvkSHLQ+YR+ EMT11720 94 PRLRWTPELHHCFVRAIHRLGGQDRATPKLVLQLMNVRGLSIGHVKSHLQMYRS 147 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.29	90	150	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	8.6E-30	90	148	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.51E-15	91	148	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.5E-23	93	149	IPR006447	Myb domain, plants
Pfam	PF00249	2.7E-9	95	146	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence Send to blast
MEASKGGDGS SGASASNDDS TVEEEGASRQ EQEDACRGNS LSSSSAPGSW GAAASNDDST 60 VEEEGASRQE QEDACRGNSL SSSSVRPYVR SKNPRLRWTP ELHHCFVRAI HRLGGQDRAT 120 PKLVLQLMNV RGLSIGHVKS HLQMYRSKKI DDSGQVIGHL PLPHAFHHRQ SGAGTMLSRF 180 GAAAWPPWRS FHEPYWAHGR PFLGSKTYNS LEAEAEAAFL RSRAQHVARA ASSNPGLMMQ 240 SGCPSRNDHH TMNHQPKRLL QLTVRNDNDT HVLLDLDLGL SLGLPVPMRE AKRRRSGCGW 300 VKEGPDEKGA DEEQVDETST ATMLSLSLFS PRDAPRKMSS TSASDHAVDE HATRRASTLD 360 LTI

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence Send to blast

MEASKGGDGS SGASASNDDS TVEEEGASRQ EQEDACRGNS LSSSSAPGSW GAAASNDDST  60
VEEEGASRQE QEDACRGNSL SSSSVRPYVR SKNPRLRWTP ELHHCFVRAI HRLGGQDRAT  120
PKLVLQLMNV RGLSIGHVKS HLQMYRSKKI DDSGQVIGHL PLPHAFHHRQ SGAGTMLSRF  180
GAAAWPPWRS FHEPYWAHGR PFLGSKTYNS LEAEAEAAFL RSRAQHVARA ASSNPGLMMQ  240
SGCPSRNDHH TMNHQPKRLL QLTVRNDNDT HVLLDLDLGL SLGLPVPMRE AKRRRSGCGW  300
VKEGPDEKGA DEEQVDETST ATMLSLSLFS PRDAPRKMSS TSASDHAVDE HATRRASTLD  360
LTI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-17	95	149	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-17	95	149	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-17	95	149	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-17	95	149	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00297	DAP	Transfer from AT2G38300	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK373646	0.0	AK373646.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3038H19.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020183942.1	0.0	transcription factor LUX-like
TrEMBL	M8BDH6	0.0	M8BDH6_AEGTA; Putative Myb family transcription factor
STRING	EMT11720	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4408	36	71

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	5e-37	G2-like family protein