PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT11663
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 576aa    MW: 64781.9 Da    PI: 9.1436
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT11663genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.53.7e-16681481399
               TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                + lv+p  f++++ggk  +  t++le+++g++++v +  + + +r++l++GW +Fv+an+++e+ +++F++ g+ +f  +v++f++
  EMT11663  68 VHSLVIPEWFVSQFGGKVWR--TVKLESPDGNVYDVGV--TENMNRTILKSGWASFVDANKIEENYSLMFHYLGNARF--KVTIFDS 148
               5779**********999766..8***************..*********************************98888..9999986 PP
2B347.33.8e-154885711599
               -EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3  15 rlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                 +l k++++ h gkk + + l+l+   ++r+W+ +l  r++ +r+ + kGW  Fv+ n+L++gD ++Fkl+++ +  +++v ++r+
  EMT11663 488 SRYLEKQYFTGHRGKK-NVISLVLQReGKSRTWDTEL--RRGTDRMRICKGWVAFVRGNRLRVGDLCLFKLMESeEPLKMMVYIIRR 571
               4567788888886554.4466888774566*******..********************************9888*********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.11156149IPR003340B3 DNA binding domain
CDDcd100173.03E-1658147No hitNo description
SuperFamilySSF1019362.16E-1859153IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.4E-1059149IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-1765150IPR015300DNA-binding pseudobarrel domain
PfamPF023622.0E-1466148IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.6E-10270365IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.02E-10271365IPR015300DNA-binding pseudobarrel domain
CDDcd100176.57E-9275366No hitNo description
SMARTSM010190.053277371IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.0E-15453574IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.73E-14458570IPR015300DNA-binding pseudobarrel domain
CDDcd100175.37E-14461570No hitNo description
SMARTSM010191.4E-4478572IPR003340B3 DNA binding domain
PfamPF023624.3E-12488571IPR003340B3 DNA binding domain
PROSITE profilePS5086312.196508572IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MDALSISKTR PAFPSTLQQP LAPRYKMFYL FSDSDVYRRI SNISKMSDPC ECCQIKLKFL  60
RQINGNFVHS LVIPEWFVSQ FGGKVWRTVK LESPDGNVYD VGVTENMNRT ILKSGWASFV  120
DANKIEENYS LMFHYLGNAR FKVTIFDSSG KQKASCCARM GTAASDVRNP STFDVDNSSS  180
SCGGGTQSSP SERSDSDGSQ KESSYGYKKS AKKAAISDSS EGLSAEDSLS RDNLVESYDV  240
QEHLNDYVLS GKCDLTVAQE AKIQALVEKI RSEIPVLVVQ MKKTSANFGN LIIRKDYALK  300
YFPCEATNII LQLPRKNKEW KCRFNPGRRN LYLGYFVHDN CVQEGDICLF QPIAKVKEGR  360
FTVIVHLLHK ESVHRSPGGT AGMTHTPTDG RTGAKTSLTA RVKEEPATDG EDMSSLGHKE  420
DGDNSEGAPE TPFILPDRAS ITPAQEQKVW KKVEAIESTV PVYVAVLNKC NVSRKYGITI  480
TMGKQYASRY LEKQYFTGHR GKKNVISLVL QREGKSRTWD TELRRGTDRM RICKGWVAFV  540
RGNRLRVGDL CLFKLMESEE PLKMMVYIIR REKCLD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198702.10.0B3 domain-containing protein Os03g0619600-like
TrEMBLM8C9590.0M8C959_AEGTA; B3 domain-containing protein
STRINGEMT116630.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58531172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-12B3 family protein