PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT11662
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 561aa    MW: 63291.9 Da    PI: 8.4377
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT11662genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.76.9e-1649134899
               -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                + +  + lv+p  f++++ggk     t++le+++g+ ++v +  + + +r++l++GW++Fv+an+++e+ +++F++ g+ +f   v++f++
  EMT11662  49 INGNFMHSLVIPEWFVNQFGGK--ICGTVRLETSDGNMYDVGV--TESMNRTILKSGWSSFVDANQIEENYSLMFRYLGNARF--EVTIFDS 134
               55556678********999888..4459***************..*********************************98888..9999986 PP
2B344.72.4e-144695581699
               EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3  16 lvlpkkfaeehggkkeesktltled.esgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                +l kkf++ h g k + + l+l+   ++r W  kl+y    r +s+++   kGW +F+++n+L+eg  ++Fkl+++ ++ +++v ++r+
  EMT11662 469 RYLRKKFTAGHHGGKCNAINLVLQReGKSRPWPTKLRYthimRASSQQMRVIKGWPSFARDNRLREGGLCLFKLMENeEQLTMMVYIIRR 558
               578999*9999556667789999884556*******99999999999999999**********************999*********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.33742135IPR003340B3 DNA binding domain
CDDcd100175.67E-1544133No hitNo description
SMARTSM010191.1E-745135IPR003340B3 DNA binding domain
SuperFamilySSF1019368.63E-1845138IPR015300DNA-binding pseudobarrel domain
PfamPF023622.8E-1446134IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.4E-1752136IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.7E-12237345IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.77E-11240349IPR015300DNA-binding pseudobarrel domain
CDDcd100174.34E-10243345No hitNo description
SMARTSM010190.0094245348IPR003340B3 DNA binding domain
PROSITE profilePS508637.5245348IPR003340B3 DNA binding domain
SMARTSM010190.0029461559IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-11464560IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.1E-10468561IPR015300DNA-binding pseudobarrel domain
PfamPF023625.0E-12469558IPR003340B3 DNA binding domain
CDDcd100172.00E-10473557No hitNo description
PROSITE profilePS5086311.265489559IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    Send to blast
MVRQTVHLCS SCTAGSRGDK VEAPGDAGIS KMHNPCECCQ IKLKFLRQIN GNFMHSLVIP  60
EWFVNQFGGK ICGTVRLETS DGNMYDVGVT ESMNRTILKS GWSSFVDANQ IEENYSLMFR  120
YLGNARFEVT IFDSNGKENT WCCSGMRNAS GVHKPSSFDV DNSSSRGGTT QSSASEGSDS  180
DGSQKERSYS SEESSAEYNL SIDNPVESDD VRNYYVLSGK CDLTEAQELK LHAFVQKIRP  240
EIPMLVVLMK KSNVRHHGDL VIRKDYAHKY LPCKDTNIIL QLPRKNKIWE CKFQIRPSGS  300
TDAGRRNLSL GDFVGDNLVR EGDICLFEPM TNTKQKRFTM TVHILGKLSI DHSPGRTTDI  360
GSNHGRRCTK MGGVKTKPPI NGEEYSSQHE ECGVSDNSEE CSEPPFMLPH RSCLTTAQEN  420
KVLEKINDIG SDSELPFYVA IMGKINVCRD SSHYINPPIL NFGFRYAARY LRKKFTAGHH  480
GGKCNAINLV LQREGKSRPW PTKLRYTHIM RASSQQMRVI KGWPSFARDN RLREGGLCLF  540
KLMENEEQLT MMVYIIRREK C
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198703.10.0B3 domain-containing protein Os03g0619600-like
TrEMBLM8B4K30.0M8B4K3_AEGTA; B3 domain-containing protein
STRINGEMT116620.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58531172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-18B3 family protein